C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 30 (zinc transporter), member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067485 Slc30a7-201 ENSMUSG00000054414 10090 - 3:115938973-116007406 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067485
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067485 6.053±2.95 10.401±0.98 5.438±0.37 3.902±2.19 7.782±2.07 9.441±2.08 2.055±0.16 5.068±0.54 3.375±1.13 11.497±0.61 0.612±0.12 9.870±3.54 4.894±1.74 1.300±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EO CIL_0007EO_0002 CGP 3:115887837-116007406

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0006829 IDA zinc ion transport
GO:0008270 IC zinc ion binding
GO:0008324 IEA cation transmembrane transporter activity
GO:0016021 IEA integral component of membrane
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0031982 IEA vesicle
GO:0032119 IEP sequestering of zinc ion
GO:0048471 IDA perinuclear region of cytoplasm
GO:0070062 IEA extracellular vesicular exosome
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000239882 ELF1-003 protein_coding Homo_sapiens 0 1218
ENST00000310528 SUGT1-003 protein_coding Homo_sapiens 0 508
ENST00000343788 SUGT1-002 protein_coding Homo_sapiens 0 307
ENST00000357650 SLC30A7-002 protein_coding Homo_sapiens 0 1485
ENST00000370112 SLC30A7-001 protein_coding Homo_sapiens 0 1613
ENST00000379452 SUGT1P2-001 processed_pseudogene Homo_sapiens 0 375
ENST00000442101 ELF1-201 protein_coding Homo_sapiens 0 745
ENST00000483074 SUGT1-001 processed_transcript Homo_sapiens 0 231
ENST00000498824 ELF1-001 processed_transcript Homo_sapiens 0 981
ENST00000604259 SUGT1P3-003 transcribed_unprocessed_pseudogene Homo_sapiens 0 217

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