C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neural cell adhesion molecule 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067602 Ncam2-002 ENSMUSG00000022762 10090 + 16:81200697-81624285 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067602
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067602 0.036±0.02 0.187±0.03 0.042±0.00 12.759±8.06 0.100±0.03 0.187±0.08 0.022±0.02 0.231±0.07 0.106±0.10 0.044±0.00 0.010±0.00 0.088±0.05 0.012±0.00 0.033±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R9 CIL_0000R9_0002 CGP 16:78953008-81624285

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007413 IEA axonal fasciculation
GO:0007608 IEA sensory perception of smell
GO:0016021 IEA integral component of membrane
GO:0030424 IDA axon
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284894 NCAM2-201 protein_coding Homo_sapiens 0 2955
ENST00000400546 NCAM2-001 protein_coding Homo_sapiens 0 3330
ENST00000461281 NCAM2-003 processed_transcript Homo_sapiens 0 560
ENST00000486367 NCAM2-004 processed_transcript Homo_sapiens 0 651

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