C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067638 Sh3bp2-001 ENSMUSG00000054520 10090 + 5:34525846-34563625 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067638
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067638 3.430±0.41 6.906±1.07 2.305±0.52 0.752±0.00 8.084±3.26 2.850±0.58 0.993±0.34 2.903±0.51 5.683±3.37 4.512±0.28 1.327±0.23 5.688±1.24 1.228±0.76 1.338±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SI CIL_0003SI_0002 CGP 5:34496087-34563638
CIL_00074C CIL_00074C_0002 CGP 5:34525838-34632308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0017124 IPI SH3 domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356331 SH3BP2-007 protein_coding Homo_sapiens 0 1644
ENST00000435136 SH3BP2-002 protein_coding Homo_sapiens 0 1644
ENST00000442312 SH3BP2-201 protein_coding Homo_sapiens 0 1644
ENST00000452765 SH3BP2-001 protein_coding Homo_sapiens 0 1653
ENST00000503393 SH3BP2-202 protein_coding Homo_sapiens 0 1642
ENST00000510204 SH3BP2-008 retained_intron Homo_sapiens 0 791
ENST00000511747 SH3BP2-006 protein_coding Homo_sapiens 0 1642
ENST00000513069 SH3BP2-025 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000515737 SH3BP2-003 nonsense_mediated_decay Homo_sapiens 0 1343
ENST00000515802 SH3BP2-009 retained_intron Homo_sapiens 0 1127

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