C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho-related BTB domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067908 Rhobtb1-201 ENSMUSG00000019944 10090 + 10:69213194-69291780 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067908
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067908 1.813±0.17 0.806±0.27 3.823±0.99 0.858±0.43 1.017±0.27 1.186±0.17 7.288±2.36 1.981±0.70 1.986±1.28 1.899±0.30 6.993±1.63 10.295±0.00 2.375±0.52 2.677±0.89

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051114 rhobtb2a-201 protein_coding Danio_rerio 2e-30 139
ENSDART00000111587 rhobtb2a-001 protein_coding Danio_rerio 2e-30 139
ENST00000337910 RHOBTB1-002 protein_coding Homo_sapiens 0 2115
ENST00000357917 RHOBTB1-001 protein_coding Homo_sapiens 0 2082
ENST00000461910 RHOBTB1-005 processed_transcript Homo_sapiens 0 296
ENST00000483488 RHOBTB1-003 processed_transcript Homo_sapiens 4e-39 165
ENST00000490827 RHOBTB1-004 processed_transcript Homo_sapiens 0 189
ENST00000496237 RHOBTB1-006 processed_transcript Homo_sapiens 0 196

Loading