C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 560
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068079 Zfp560-001 ENSMUSG00000045519 10090 - 9:20345136-20385177 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068079
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068079 0.639±0.14 0.536±0.14 1.430±0.19 2.229±1.37 0.730±0.10 0.579±0.08 0.357±0.08 0.652±0.10 0.380±0.12 0.570±0.17 0.295±0.06 1.419±0.53 0.487±0.20 0.245±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WQ CIL_0004WQ_0003 CGP 9:20345136-20460162

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253115 ZNF426-001 protein_coding Homo_sapiens 9e-32 143
ENST00000292562 ZNF251-001 protein_coding Homo_sapiens 0.00000000000006 84
ENST00000301480 ZNF560-001 protein_coding Homo_sapiens 0 274
ENST00000304060 ZNF440-001 protein_coding Homo_sapiens 1e-32 147
ENST00000310898 ZNF621-201 protein_coding Homo_sapiens 0.0000000001 73
ENST00000320451 ZNF121-004 protein_coding Homo_sapiens 0 265
ENST00000323169 ZNF491-001 protein_coding Homo_sapiens 0.00000000000006 84
ENST00000339282 ZNF564-002 protein_coding Homo_sapiens 0.0000000001 73
ENST00000339296 ZNF621-001 protein_coding Homo_sapiens 0.0000000003 73
ENST00000340963 ZNF780A-201 protein_coding Homo_sapiens 2e-20 106
ENST00000343979 ZNF136-001 protein_coding Homo_sapiens 1e-22 113
ENST00000397902 ZNF846-001 protein_coding Homo_sapiens 0 226
ENST00000403205 ZNF621-002 protein_coding Homo_sapiens 0.0000000001 73
ENST00000420450 ZNF345-001 protein_coding Homo_sapiens 2e-27 128
ENST00000429654 ZNF69-002 protein_coding Homo_sapiens 4e-25 121
ENST00000450241 ZNF780A-001 protein_coding Homo_sapiens 4e-20 106
ENST00000453351 ZNF621-005 protein_coding Homo_sapiens 0.00000000003 73
ENST00000455521 ZNF780A-202 protein_coding Homo_sapiens 2e-20 106
ENST00000464860 ZNF136-002 retained_intron Homo_sapiens 1e-22 113
ENST00000490457 ZNF621-007 processed_transcript Homo_sapiens 0.00000000004 73
ENST00000492098 ZNF621-004 retained_intron Homo_sapiens 0.00000000005 73
ENST00000529555 ZNF345-003 protein_coding Homo_sapiens 4e-27 128
ENST00000535489 ZNF426-003 protein_coding Homo_sapiens 9e-32 143
ENST00000586293 ZNF846-002 protein_coding Homo_sapiens 0 226
ENST00000586602 ZNF121-003 protein_coding Homo_sapiens 0 265
ENST00000588221 ZNF266-001 protein_coding Homo_sapiens 0 324
ENST00000588267 ZNF846-004 protein_coding Homo_sapiens 6e-38 163
ENST00000588933 ZNF266-003 protein_coding Homo_sapiens 0 324
ENST00000589046 ZNF345-010 protein_coding Homo_sapiens 3e-27 128
ENST00000589453 ZNF846-003 nonsense_mediated_decay Homo_sapiens 5e-38 163
ENST00000590306 ZNF266-005 protein_coding Homo_sapiens 0 324
ENST00000592292 ZNF266-004 protein_coding Homo_sapiens 0 324
ENST00000592859 ZNF846-005 protein_coding Homo_sapiens 3e-38 163
ENST00000592904 ZNF266-002 protein_coding Homo_sapiens 0 324
ENST00000593003 ZNF426-002 protein_coding Homo_sapiens 9e-32 143
ENST00000593682 CTD-2192J16.20-001 nonsense_mediated_decay Homo_sapiens 0.0000000003 73
ENST00000594395 ZNF780A-008 protein_coding Homo_sapiens 1e-20 106
ENST00000595687 ZNF780A-009 protein_coding Homo_sapiens 2e-20 106
ENST00000612318 ZNF251-201 protein_coding Homo_sapiens 0.00000000000007 84
ENST00000612719 ZNF345-201 protein_coding Homo_sapiens 3e-27 128
ENST00000614069 ZNF345-202 protein_coding Homo_sapiens 3e-27 128

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