C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 780A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450241 ZNF780A-001 ENSG00000197782 9606 - 19:40069152-40090888 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderHeartKidneyLiverLungOvaryPlacentaTestisENST00000450241
Transcript ID Adrenal Bladder Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000450241 1.371±0.00 1.139±0.00 0.887±0.00 1.315±0.00 0.353±0.00 0.230±0.00 0.997±0.61 0.551±0.00 0.949±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047W CIL_00047W_0001 CGP 19:40028260-40090938

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA:IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081618 Zfp780b-201 protein_coding Mus_musculus 0 743
ENSMUST00000108332 Gm7452-201 pseudogene Mus_musculus 0 353
ENSMUST00000057652 Zfp420-001 protein_coding Mus_musculus 0 255
ENSMUST00000145952 Zfp420-003 processed_transcript Mus_musculus 0 255
ENSMUST00000074876 Zfp420-002 protein_coding Mus_musculus 0 255
ENSMUST00000098639 1700049G17Rik-001 protein_coding Mus_musculus 0 248
ENSMUST00000076421 C030039L03Rik-201 protein_coding Mus_musculus 0 204
ENSMUST00000120004 C030039L03Rik-001 protein_coding Mus_musculus 0 204
ENSMUST00000167955 Zfp60-201 protein_coding Mus_musculus 1e-39 171
ENSMUST00000042641 Zfp60-002 protein_coding Mus_musculus 1e-39 171
ENSMUST00000108336 Zfp60-001 protein_coding Mus_musculus 1e-39 171
ENSMUST00000108331 Zfp59-201 protein_coding Mus_musculus 4e-30 139
ENSMUST00000077787 Zfp14-201 protein_coding Mus_musculus 6e-23 115
ENSMUST00000063262 Zfp68-003 protein_coding Mus_musculus 3e-21 110
ENSMUST00000085852 Zfp68-002 protein_coding Mus_musculus 3e-21 110
ENSMUST00000110905 Zfp68-001 protein_coding Mus_musculus 3e-21 110
ENSMUST00000182746 Gm26920-001 nonsense_mediated_decay Mus_musculus 3e-21 110
ENSMUST00000182248 Zfp566-002 retained_intron Mus_musculus 3e-21 110
ENSMUST00000088785 Zfp566-001 protein_coding Mus_musculus 1e-20 108
ENSMUST00000068079 Zfp560-001 protein_coding Mus_musculus 4e-20 106
ENSMUST00000120767 Gm13788-001 processed_pseudogene Mus_musculus 6e-18 99
ENSMUST00000127027 Zfp960-001 protein_coding Mus_musculus 0.000000000000004 90
ENSMUST00000006903 Zfp184-201 protein_coding Mus_musculus 0.0000000000002 84
ENSMUST00000102978 Zfp184-002 protein_coding Mus_musculus 0.0000000000002 84
ENSMUST00000176580 Zfp184-001 nonsense_mediated_decay Mus_musculus 0.0000000000002 84
ENSMUST00000176511 Zfp184-004 protein_coding Mus_musculus 0.0000000000002 84
ENSMUST00000063463 Gm21994-201 protein_coding Mus_musculus 0.0000000000002 84
ENSMUST00000182546 Zfp82-006 protein_coding Mus_musculus 0.0000000000006 82
ENSMUST00000080834 Zfp82-001 protein_coding Mus_musculus 0.0000000000006 82
ENSMUST00000182483 Zfp82-003 retained_intron Mus_musculus 0.0000000000006 82
ENSMUST00000183025 Zfp82-007 retained_intron Mus_musculus 0.0000000000006 82
ENSMUST00000068296 Zfp266-201 protein_coding Mus_musculus 0.000000000002 81
ENSMUST00000174462 Zfp266-001 protein_coding Mus_musculus 0.000000000002 81
ENSMUST00000109922 Gm14124-001 protein_coding Mus_musculus 0.000000000008 79
ENSMUST00000166005 Zfp426-201 protein_coding Mus_musculus 0.0000000004 73
ENSMUST00000163348 Zfp426-012 protein_coding Mus_musculus 0.0000000004 73
ENSMUST00000080386 Zfp426-002 protein_coding Mus_musculus 0.0000000004 73
ENSMUST00000169558 Zfp426-004 protein_coding Mus_musculus 0.0000000004 73
ENSMUST00000167457 Zfp426-003 protein_coding Mus_musculus 0.0000000004 73
ENSMUST00000115562 Zfp426-001 protein_coding Mus_musculus 0.0000000004 73
ENSMUST00000168095 Zfp426-008 nonsense_mediated_decay Mus_musculus 0.0000000004 73
ENSMUST00000086281 Zfp599-001 protein_coding Mus_musculus 0.000000001 71
ENSMUST00000098550 Zfp791-201 protein_coding Mus_musculus 0.000000001 71
ENSMUST00000109997 Zfp961-201 protein_coding Mus_musculus 0.000000005 69
ENSMUST00000133866 Zfp961-006 processed_transcript Mus_musculus 0.000000005 69
ENSMUST00000138304 Zfp961-004 processed_transcript Mus_musculus 0.000000005 69
ENSMUST00000131237 Zfp961-001 protein_coding Mus_musculus 0.000000005 69
ENSMUST00000040628 Zfp182-002 protein_coding Mus_musculus 0.00000006 66
ENSMUST00000115334 Zfp182-003 protein_coding Mus_musculus 0.00000006 66
ENSMUST00000115333 Zfp182-001 protein_coding Mus_musculus 0.00000006 66

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