C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: opsin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371211 OPN5-003 ENSG00000124818 9606 + 6:47782039-47824699 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000371211
Transcript ID Testis
ENST00000371211 1.168±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007R CIL_00007R_0002 CGP 6:47781982-48068689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005502 IEA 11-cis retinal binding
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007601 IEA visual perception
GO:0007602 IEA phototransduction
GO:0009881 IEA photoreceptor activity
GO:0016021 IEA integral component of membrane
GO:0018298 IEA protein-chromophore linkage

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068355 Opn5-201 protein_coding Mus_musculus 0 1371

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