C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Eph receptor A6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068860 Epha6-001 ENSMUSG00000055540 10090 - 16:59653483-60605248 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000068860
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000068860 0.013±0.00 1.165±1.07 0.026±0.02 0.079±0.02 0.051±0.01 0.041±0.04 0.005±0.00 0.014±0.00 0.032±0.02 0.006±0.00 0.447±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005003 IEA ephrin receptor activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005887 IEA integral component of plasma membrane
GO:0016021 IEA integral component of membrane
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0048013 IEA ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374627 EPHB2-004 protein_coding Homo_sapiens 0 274
ENST00000374630 EPHB2-003 protein_coding Homo_sapiens 0 274
ENST00000374632 EPHB2-002 protein_coding Homo_sapiens 0 274
ENST00000389672 EPHA6-002 protein_coding Homo_sapiens 0 4643
ENST00000400191 EPHB2-001 protein_coding Homo_sapiens 0 274
ENST00000470610 EPHA6-001 protein_coding Homo_sapiens 0 2102
ENST00000477384 EPHA6-004 nonsense_mediated_decay Homo_sapiens 0 841
ENST00000502694 EPHA6-006 protein_coding Homo_sapiens 0 1127
ENST00000503760 EPHA6-003 nonsense_mediated_decay Homo_sapiens 0 654
ENST00000506569 EPHA6-005 protein_coding Homo_sapiens 0 1190
ENST00000508345 EPHA6-008 nonsense_mediated_decay Homo_sapiens 0 1042
ENST00000514100 EPHA6-007 protein_coding Homo_sapiens 0 1127

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