C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068875 Apobec4-001 ENSMUSG00000055547 10090 + 1:152750551-152757544 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungOvaryPlacentaTestisENSMUST00000068875
Transcript ID Brain Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000068875 0.048±0.01 0.079±0.02 0.038±0.00 0.031±0.04 0.230±0.08 0.144±0.07 0.029±0.01 27.155±9.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IE CIL_0005IE_0002 CGP 1:152516760-152766351

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016814 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308641 APOBEC4-001 protein_coding Homo_sapiens 0 593

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