C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308641 APOBEC4-001 ENSG00000173627 9606 - 1:183646404-183653313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLungOvaryTestisENST00000308641
Transcript ID Adipose Brain Breast Colon Heart Kidney Lung Ovary Testis
ENST00000308641 0.004±0.00 0.166±0.15 0.050±0.00 0.122±0.00 0.066±0.05 0.126±0.00 0.686±0.03 0.280±0.34 3.309±1.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IE CIL_0005IE_0001 CGP 1:183636085-183928531

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006397 IEA mRNA processing
GO:0008270 IEA zinc ion binding
GO:0016814 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068875 Apobec4-001 protein_coding Mus_musculus 0 593

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