C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: related RAS viral (r-ras) oncogene homolog 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069449 Rras2-201 ENSMUSG00000055723 10090 - 7:114046785-114117781 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069449
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069449 13.216±1.54 22.691±6.53 18.033±3.69 7.642±3.73 25.469±16.88 31.239±3.90 12.133±0.90 13.693±2.33 6.074±0.78 24.548±1.78 5.937±0.72 25.098±9.26 32.227±9.03 3.454±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PM CIL_0003PM_0002 CGP 7:113765998-114117781
CIL_0003PN CIL_0003PN_0002 CGP 7:114046785-114254680

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IEA osteoblast differentiation
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IDA intracellular
GO:0005886 IEA plasma membrane
GO:0005925 IEA focal adhesion
GO:0006184 IEA GTP catabolic process
GO:0007265 IDA Ras protein signal transduction
GO:0009987 IDA cellular process
GO:0030335 IGI positive regulation of cell migration
GO:0070062 IEA extracellular vesicular exosome
GO:1901214 IEA regulation of neuron death

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000025496 rras-001 protein_coding Danio_rerio 2e-32 145
ENSDART00000061426 rras-201 protein_coding Danio_rerio 2e-27 128
ENSDART00000141919 rras-003 retained_intron Danio_rerio 1e-20 106
ENSDART00000141793 rras-002 protein_coding Danio_rerio 5e-19 100
ENSDART00000139392 rras-004 retained_intron Danio_rerio 0.000000000000001 90
ENST00000256196 RRAS2-001 protein_coding Homo_sapiens 0 1341
ENST00000371513 SCP2-004 protein_coding Homo_sapiens 0 597
ENST00000412747 AC104772.1-001 processed_pseudogene Homo_sapiens 0 411
ENST00000414023 RRAS2-006 protein_coding Homo_sapiens 0 1363
ENST00000414168 RP11-334A14.2-001 processed_pseudogene Homo_sapiens 0 689
ENST00000478631 SCP2-009 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000526063 RRAS2-004 protein_coding Homo_sapiens 0 880
ENST00000526717 RRAS2-009 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000529237 RRAS2-008 protein_coding Homo_sapiens 0 1125
ENST00000531421 RRAS2-012 protein_coding Homo_sapiens 0 453
ENST00000531807 RRAS2-007 protein_coding Homo_sapiens 0 608
ENST00000532814 RRAS2-003 protein_coding Homo_sapiens 0 876
ENST00000532950 RRAS2-010 nonsense_mediated_decay Homo_sapiens 0 569
ENST00000534746 RRAS2-005 protein_coding Homo_sapiens 0 994
ENST00000537760 RRAS2-201 protein_coding Homo_sapiens 0 1363
ENST00000545643 RRAS2-202 protein_coding Homo_sapiens 0 881

Loading