C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003PN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000133818-ENSG00000129083 CGP 9606 11:14277926-14500027
GeneTranscriptPositionBiotype
ENSG00000129083 (COPB1)
coatomer protein complex, subunit beta 1 		ENST00000249923 (COPB1-001) 14457506-14499852 protein_coding
ENST00000439561 (COPB1-002) 14457550-14499895 protein_coding
ENST00000525214 (COPB1-009) 14451835-14461222 processed_transcript
ENST00000526191 (COPB1-011) 14474010-14475875 processed_transcript
ENST00000526527 (COPB1-008) 14460016-14461341 processed_transcript
ENST00000529210 (COPB1-005) 14494317-14499846 processed_transcript
ENST00000529866 (COPB1-012) 14493721-14499862 protein_coding
ENST00000532088 (COPB1-010) 14443440-14457886 processed_transcript
ENST00000533096 (COPB1-013) 14494260-14499666 processed_transcript
ENST00000533533 (COPB1-006) 14494310-14499810 processed_transcript
ENST00000534234 (COPB1-003) 14476917-14499811 protein_coding
ENST00000534771 (COPB1-004) 14493737-14500027 protein_coding
ENSG00000133818 (RRAS2)
related RAS viral (r-ras) oncogene homolog 2 		ENST00000256196 (RRAS2-001) 14278750-14359184 protein_coding
ENST00000414023 (RRAS2-006) 14277964-14295859 protein_coding
ENST00000526063 (RRAS2-004) 14279103-14358485 protein_coding
ENST00000526717 (RRAS2-009) 14294460-14359155 nonsense_mediated_decay
ENST00000529237 (RRAS2-008) 14278682-14364506 protein_coding
ENST00000531421 (RRAS2-012) 14281690-14337166 protein_coding
ENST00000531807 (RRAS2-007) 14279397-14342094 protein_coding
ENST00000532814 (RRAS2-003) 14279110-14358485 protein_coding
ENST00000532950 (RRAS2-010) 14281602-14359147 nonsense_mediated_decay
ENST00000534746 (RRAS2-005) 14278939-14354500 protein_coding
ENST00000537760 (RRAS2-201) 14277926-14364506 protein_coding
ENST00000545643 (RRAS2-202) 14279337-14358870 protein_coding
ENSG00000251991 (RNU7-49P)
RNA, U7 small nuclear 49 pseudogene 		ENST00000516182 (RNU7-49P-201) 14478892-14478953 snRNA
ENSG00000255074 (RP11-140L24.3)
 ENST00000534211 (RP11-140L24.3-001) 14440787-14441677 processed_pseudogene
CIL_0003PN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055723-ENSMUSG00000030754 CGP 10090 7:114046785-114254680
GeneTranscriptPositionBiotype
ENSMUSG00000030754 (Copb1)
coatomer protein complex, subunit beta 1 		ENSMUST00000033012 (Copb1-201) 114215559-114254680 protein_coding
ENSMUSG00000055723 (Rras2)
related RAS viral (r-ras) oncogene homolog 2 		ENSMUST00000069449 (Rras2-201) 114046785-114117781 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PN_0001ENSG00000129083ENST00000249923ENST00000439561ENST00000525214ENST00000526191ENST00000526527ENST00000529210ENST00000529866ENST00000532088ENST00000533096ENST00000533533ENST00000534234ENST00000534771ENSG00000133818ENST00000256196ENST00000414023ENST00000526063ENST00000526717ENST00000529237ENST00000531421ENST00000531807ENST00000532814ENST00000532950ENST00000534746ENST00000537760ENST00000545643ENSG00000251991ENST00000516182ENSG00000255074ENST00000534211CIL_0003PN_0002ENSMUSG00000030754ENSMUST00000033012ENSMUSG00000055723ENSMUST00000069449
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PN_0001ENSG00000129083ENST00000249923ENST00000439561ENST00000534234ENSG00000133818ENST00000256196ENST00000414023ENST00000526063ENST00000531807ENST00000537760ENST00000545643ENSG00000251991ENST00000516182ENSG00000255074ENST00000534211CIL_0003PN_0002ENSMUSG00000030754ENSMUST00000033012ENSMUSG00000055723ENSMUST00000069449
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129083 ENST00000249923 4.969±0.00 6.152±0.00 N/A N/A N/A 9.046±0.00 2.030±0.00 8.123±2.34 N/A 2.344±0.00 N/A 6.981±0.00 4.885±0.00 5.874±0.48
ENST00000439561 18.175±0.00 14.661±0.00 2.108±0.00 7.321±3.87 9.354±3.18 11.283±0.16 8.053±5.29 24.689±0.00 9.215±4.28 15.117±5.74 9.081±0.00 19.130±4.69 17.380±3.25 14.733±1.18
ENST00000525214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534234 N/A N/A N/A N/A N/A N/A N/A N/A 9.457±0.00 7.057±0.00 N/A 9.905±0.00 N/A N/A
ENST00000534771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000133818 ENST00000256196 4.449±0.00 N/A N/A 0.686±0.33 4.767±3.35 1.865±0.19 4.341±0.00 7.882±0.00 3.483±0.00 N/A 5.776±0.00 1.575±0.00 6.127±1.35 3.166±0.00
ENST00000414023 3.376±0.00 2.536±0.00 1.271±0.00 N/A 3.687±2.18 3.057±0.00 2.973±0.00 6.236±0.22 3.016±0.00 1.210±0.00 5.619±0.00 4.969±2.70 8.066±4.87 9.069±3.48
ENST00000526063 2.775±0.00 3.182±0.00 N/A N/A 6.880±0.00 2.455±0.00 N/A N/A N/A N/A N/A 1.000±0.00 N/A N/A
ENST00000526717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531807 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.364±0.00 N/A N/A N/A N/A
ENST00000532814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537760 N/A N/A N/A N/A 2.335±0.00 1.849±0.00 1.575±0.00 N/A N/A N/A N/A 4.904±0.00 5.015±0.00 4.132±0.00
ENST00000545643 N/A N/A 2.249±0.00 1.658±0.55 2.236±0.00 3.841±0.00 3.968±0.00 5.239±0.00 5.170±0.00 N/A 2.065±0.00 8.210±6.33 39.743±0.00 29.063±0.00
ENSG00000251991 ENST00000516182 1.728±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255074 ENST00000534211 0.192±0.00 0.422±0.00 N/A 0.046±0.00 0.090±0.00 0.246±0.00 0.039±0.00 0.305±0.00 0.191±0.00 0.393±0.00 0.293±0.00 N/A N/A 0.103±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030754 ENSMUST00000033012 29.315±8.47 27.742±2.98 17.953±0.80 13.138±4.77 21.191±8.66 33.171±3.75 9.107±1.65 19.821±6.15 18.756±4.23 30.700±5.24 5.936±0.46 25.172±8.58 46.112±4.37 12.801±0.75
ENSMUSG00000055723 ENSMUST00000069449 13.216±1.54 22.691±6.53 18.033±3.69 7.642±3.73 25.469±16.88 31.239±3.90 12.133±0.90 13.693±2.33 6.074±0.78 24.548±1.78 5.937±0.72 25.098±9.26 32.227±9.03 3.454±0.96

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