C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 7936
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069529 Gm7936-201 ENSMUSG00000055771 10090 - 18:30495001-30495375 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMusclePlacentaENSMUST00000069529
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta
ENSMUST00000069529 0.377±0.24 0.037±0.00 0.018±0.00 0.995±0.58 0.452±0.16 0.327±0.06 0.128±0.00 0.064±0.04 0.154±0.00 0.179±0.00 0.327±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XU CIL_0006XU_0002 CGP 18:30272747-31317290

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257899 BLOC1S1-004 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000547076 BLOC1S1-006 protein_coding Homo_sapiens 0 470
ENST00000548556 BLOC1S1-007 protein_coding Homo_sapiens 0 379
ENST00000548925 BLOC1S1-001 protein_coding Homo_sapiens 0 545
ENST00000549147 BLOC1S1-002 protein_coding Homo_sapiens 0 387
ENST00000549424 BLOC1S1-003 protein_coding Homo_sapiens 0 220
ENST00000550412 BLOC1S1-001 protein_coding Homo_sapiens 0 387
ENST00000551926 BLOC1S1-008 protein_coding Homo_sapiens 0 311
ENST00000551946 BLOC1S1-002 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000553100 BLOC1S1-005 nonsense_mediated_decay Homo_sapiens 0 383

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