C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070735 Gabrg2-003 ENSMUSG00000020436 10090 - 11:41911709-42000532 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENSMUST00000070735
Transcript ID Brain Muscle
ENSMUST00000070735 10.351±2.63 0.052±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IDA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IMP chloride channel activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005887 IMP integral component of plasma membrane
GO:0007214 IDA gamma-aminobutyric acid signaling pathway
GO:0007268 IDA synaptic transmission
GO:0009791 IMP post-embryonic development
GO:0030054 IEA cell junction
GO:0030424 IDA axon
GO:0030534 IMP adult behavior
GO:0032590 IEA dendrite membrane
GO:0034707 IEA chloride channel complex
GO:0045211 IEA postsynaptic membrane
GO:0051932 IEA synaptic transmission, GABAergic
GO:0060077 IEA inhibitory synapse
GO:0071420 IDA cellular response to histamine
GO:1902476 IMP chloride transmembrane transport
GO:1902711 IMP GABA-A receptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356592 GABRG2-001 protein_coding Homo_sapiens 0 2372
ENST00000361925 GABRG2-002 protein_coding Homo_sapiens 0 2054
ENST00000414552 GABRG2-003 protein_coding Homo_sapiens 0 1264
ENST00000522053 GABRG2-005 protein_coding Homo_sapiens 0 926
ENST00000522990 GABRG2-006 nonsense_mediated_decay Homo_sapiens 0 1448
ENST00000523372 GABRG2-004 nonsense_mediated_decay Homo_sapiens 0 1722

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