C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: branched chain ketoacid dehydrogenase kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071056 Bckdk-001 ENSMUSG00000030802 10090 + 7:127904082-127909664 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071056
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071056 22.149±12.61 36.183±6.55 5.784±0.50 5.923±4.84 21.817±5.05 15.006±7.36 10.864±1.48 14.679±1.99 4.859±3.59 10.505±1.13 14.080±10.81 15.981±8.45 11.371±6.81 1.044±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UF CIL_0006UF_0002 CGP 7:127893067-127909664
CIL_00043A CIL_00043A_0002 CGP 7:127904082-127925832

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IDA protein kinase activity
GO:0004674 ISS protein serine/threonine kinase activity
GO:0005515 IEA protein binding
GO:0005524 ISS ATP binding
GO:0005739 IDA mitochondrion
GO:0005947 ISS mitochondrial alpha-ketoglutarate dehydrogenase complex
GO:0006468 IDA:IEA protein phosphorylation
GO:0009083 ISS branched-chain amino acid catabolic process
GO:0016310 ISS phosphorylation
GO:0047323 IEA [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219794 BCKDK-001 protein_coding Homo_sapiens 0 1543
ENST00000287507 BCKDK-003 protein_coding Homo_sapiens 0 961
ENST00000394950 BCKDK-002 protein_coding Homo_sapiens 0 1299
ENST00000394951 BCKDK-004 protein_coding Homo_sapiens 0 1478
ENST00000484226 BCKDK-010 protein_coding Homo_sapiens 0 553
ENST00000566568 BCKDK-005 retained_intron Homo_sapiens 0 710
ENST00000567530 BCKDK-006 nonsense_mediated_decay Homo_sapiens 0 706

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