C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium and integrin binding 1 (calmyrin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071457 Cib1-002 ENSMUSG00000030538 10090 - 7:80227157-80232619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartMuscleOvaryPlacentaENSMUST00000071457
Transcript ID Breast Heart Muscle Ovary Placenta
ENSMUST00000071457 17.904±0.00 2.845±0.07 0.805±0.00 21.146±2.58 32.177±12.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AY CIL_0008AY_0002 VISTA 7:80145068-80746500
CIL_0000SV CIL_0000SV_0002 CGP 7:80186841-80232813
CIL_0000SU CIL_0000SU_0002 CGP 7:80227156-80241006

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007229 IEA integrin-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328649 CIB1-001 protein_coding Homo_sapiens 0 508
ENST00000612800 CIB1-201 protein_coding Homo_sapiens 0 508

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