C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071652 Mthfd2l-201 ENSMUSG00000029376 10090 + 5:90931196-91021360 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071652 1.849±0.81 4.231±0.83 2.903±0.13 9.388±6.19 2.358±0.89 2.207±0.64 1.308±0.26 1.135±0.28 0.864±0.56 2.396±0.29 0.947±0.25 3.620±1.70 0.543±0.28 0.701±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035M CIL_00035M_0002 CGP 5:90903899-91021360
CIL_0006SN CIL_0006SN_0002 CGP 5:90931196-91035215

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000105 IEA histidine biosynthetic process
GO:0004477 IBA methenyltetrahydrofolate cyclohydrolase activity
GO:0004487 IBA methylenetetrahydrofolate dehydrogenase (NAD+) activity
GO:0004488 IBA methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0005739 IBA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006164 IEA purine nucleotide biosynthetic process
GO:0006730 IBA one-carbon metabolic process
GO:0009086 IEA methionine biosynthetic process
GO:0009396 IEA folic acid-containing compound biosynthetic process
GO:0035999 IEA tetrahydrofolate interconversion
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325278 MTHFD2L-001 protein_coding Homo_sapiens 0 1140
ENST00000359107 MTHFD2L-011 protein_coding Homo_sapiens 0 819
ENST00000395759 MTHFD2L-201 protein_coding Homo_sapiens 0 1140
ENST00000423607 MTHFD2L-009 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000429335 MTHFD2L-008 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000429519 MTHFD2L-005 nonsense_mediated_decay Homo_sapiens 0 682
ENST00000433372 MTHFD2L-202 protein_coding Homo_sapiens 0 682

Loading