C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00035M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000081041-ENSG00000163738 CGP 9606 4:74097035-74303099
GeneTranscriptPositionBiotype
ENSG00000081041 (CXCL2)
chemokine (C-X-C motif) ligand 2 		ENST00000296031 (CXCL2-003) 74097676-74099195 processed_transcript
ENST00000508487 (CXCL2-001) 74097035-74099293 protein_coding
ENST00000510048 (CXCL2-002) 74098531-74099196 retained_intron
ENSG00000163738 (MTHFD2L)
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like 		ENST00000325278 (MTHFD2L-001) 74158173-74303099 protein_coding
ENST00000359107 (MTHFD2L-011) 74158150-74281550 protein_coding
ENST00000395759 (MTHFD2L-201) 74158112-74303092 protein_coding
ENST00000423607 (MTHFD2L-009) 74158108-74183931 nonsense_mediated_decay
ENST00000429335 (MTHFD2L-008) 74123344-74181750 nonsense_mediated_decay
ENST00000429519 (MTHFD2L-005) 74114174-74242210 nonsense_mediated_decay
ENST00000433372 (MTHFD2L-202) 74125438-74242197 protein_coding
ENST00000461101 (MTHFD2L-010) 74158118-74162253 processed_transcript
ENST00000461856 (MTHFD2L-003) 74224068-74301990 processed_transcript
ENST00000465255 (MTHFD2L-004) 74280241-74302635 processed_transcript
ENST00000475291 (MTHFD2L-007) 74123339-74160770 retained_intron
ENST00000484725 (MTHFD2L-012) 74158175-74162106 processed_transcript
ENST00000490128 (MTHFD2L-013) 74281425-74293675 processed_transcript
ENST00000490698 (MTHFD2L-006) 74123273-74160514 retained_intron
ENST00000492183 (MTHFD2L-002) 74194040-74302598 retained_intron
ENSG00000269559 (RP11-629B11.5)
 ENST00000600169 (RP11-629B11.5-001) 74156511-74158373 antisense
CIL_00035M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000058427-ENSMUSG00000029376 CGP 10090 5:90903899-91021360
GeneTranscriptPositionBiotype
ENSMUSG00000029376 (Mthfd2l)
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like 		ENSMUST00000071652 (Mthfd2l-201) 90931196-91021360 protein_coding
ENSMUSG00000058427 (Cxcl2)
chemokine (C-X-C motif) ligand 2 		ENSMUST00000075433 (Cxcl2-201) 90903899-90905909 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00035M_0001ENSG00000081041ENST00000296031ENST00000508487ENST00000510048ENSG00000163738ENST00000325278ENST00000359107ENST00000395759ENST00000423607ENST00000429335ENST00000429519ENST00000433372ENST00000461101ENST00000461856ENST00000465255ENST00000475291ENST00000484725ENST00000490128ENST00000490698ENST00000492183ENSG00000269559ENST00000600169CIL_00035M_0002ENSMUSG00000029376ENSMUST00000071652ENSMUSG00000058427ENSMUST00000075433
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00035M_0001ENSG00000081041ENST00000296031ENST00000508487ENST00000510048ENSG00000163738ENST00000325278ENST00000359107ENST00000395759ENST00000423607ENST00000429335ENST00000433372ENST00000461101ENST00000475291ENST00000490698ENSG00000269559ENST00000600169CIL_00035M_0002ENSMUSG00000029376ENSMUST00000071652ENSMUSG00000058427ENSMUST00000075433
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000081041 ENST00000296031 N/A N/A N/A N/A N/A N/A 1.799±0.00 N/A N/A 21.103±0.00 N/A N/A N/A N/A
ENST00000508487 0.775±0.00 N/A 0.506±0.00 0.609±0.09 2.450±1.38 0.552±0.41 0.936±0.00 27.160±0.00 18.817±15.30 8.909±6.47 1.152±0.47 7.483±4.60 0.750±0.62 1.237±0.92
ENST00000510048 0.613±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.728±0.00 N/A N/A 0.125±0.00 N/A
ENSG00000163738 ENST00000325278 N/A N/A N/A N/A N/A N/A 1.360±0.00 N/A N/A N/A N/A 0.618±0.15 0.308±0.00 N/A
ENST00000359107 N/A N/A 0.701±0.00 5.023±0.00 1.484±0.00 1.255±0.00 2.893±0.00 N/A 2.865±0.00 1.723±0.00 N/A 2.310±1.40 0.731±0.00 N/A
ENST00000395759 0.323±0.00 N/A N/A 1.360±0.00 0.921±0.00 0.587±0.00 N/A N/A 0.862±0.00 N/A 0.519±0.00 N/A N/A 0.557±0.00
ENST00000423607 N/A N/A N/A N/A N/A 0.526±0.00 N/A 0.659±0.00 N/A 0.426±0.00 N/A N/A 0.177±0.00 1.151±0.00
ENST00000429335 N/A N/A N/A N/A N/A N/A N/A 2.667±0.00 N/A N/A 0.693±0.00 N/A N/A N/A
ENST00000429519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433372 N/A 1.412±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.662±0.00 N/A N/A
ENST00000461101 0.411±0.00 1.662±0.00 0.514±0.00 1.373±0.25 1.162±0.00 1.126±0.26 1.202±0.13 2.760±0.95 N/A 0.505±0.00 0.334±0.00 1.178±0.52 0.446±0.18 N/A
ENST00000461856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475291 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.697±0.54 0.495±0.00 N/A 0.463±0.00 1.414±0.00
ENST00000484725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490698 0.692±0.00 N/A N/A N/A N/A 1.177±0.00 N/A N/A 3.576±0.00 N/A N/A N/A 1.210±0.00 N/A
ENST00000492183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000269559 ENST00000600169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.327±1.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029376 ENSMUST00000071652 1.849±0.81 4.231±0.83 2.903±0.13 9.388±6.19 2.358±0.89 2.207±0.64 1.308±0.26 1.135±0.28 0.864±0.56 2.396±0.29 0.947±0.25 3.620±1.70 0.543±0.28 0.701±0.00
ENSMUSG00000058427 ENSMUST00000075433 0.181±0.12 0.233±0.15 0.009±0.00 0.008±0.00 0.132±0.01 0.119±0.04 0.048±0.02 0.093±0.07 0.055±0.03 0.187±0.09 0.028±0.01 0.228±0.13 0.077±0.02 N/A

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