C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000YF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000083223-ENSG00000180447 CGP 9606 9:86287733-86947189
GeneTranscriptPositionBiotype
ENSG00000083223 (ZCCHC6)
zinc finger, CCHC domain containing 6 		ENST00000277141 (ZCCHC6-003) 86287733-86354410 protein_coding
ENST00000375947 (ZCCHC6-006) 86344870-86352706 protein_coding
ENST00000375948 (ZCCHC6-005) 86336879-86343123 protein_coding
ENST00000375957 (ZCCHC6-002) 86287735-86319644 protein_coding
ENST00000375960 (ZCCHC6-004) 86287733-86354454 protein_coding
ENST00000375963 (ZCCHC6-001) 86287959-86354412 protein_coding
ENST00000469004 (ZCCHC6-007) 86323628-86324653 processed_transcript
ENSG00000180447 (GAS1)
growth arrest-specific 1 		ENST00000298743 (GAS1-001) 86944363-86947189 protein_coding
ENSG00000214908 (RP11-229M1.2)
 ENST00000422735 (RP11-229M1.2-001) 86374966-86375706 processed_pseudogene
ENSG00000232211 (RP11-395D3.1)
 ENST00000443163 (RP11-395D3.1-001) 86632147-86696496 lincRNA
ENSG00000235819 (RP11-359J6.1)
 ENST00000438582 (RP11-359J6.1-001) 86414282-86414570 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0000YF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035248-ENSMUSG00000052957 CGP 10090 13:59771879-60177365
GeneTranscriptPositionBiotype
ENSMUSG00000035248 (Zcchc6)
zinc finger, CCHC domain containing 6 		ENSMUST00000071703 (Zcchc6-201) 59771879-59823147 protein_coding
ENSMUSG00000052957 (Gas1)
growth arrest specific 1 		ENSMUST00000065086 (Gas1-001) 60174405-60177365 protein_coding
ENSMUSG00000089875 (Etohd2)
ethanol decreased 2 		ENSMUST00000162450 (Etohd2-001) 59769966-59773680 processed_transcript
ENSMUST00000163053 (Etohd2-002) 59769965-59771939 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000YF_0001ENSG00000083223ENST00000277141ENST00000375947ENST00000375948ENST00000375957ENST00000375960ENST00000375963ENST00000469004ENSG00000180447ENST00000298743ENSG00000214908ENST00000422735ENSG00000232211ENST00000443163ENSG00000235819ENST00000438582CIL_0000YF_0002ENSMUSG00000035248ENSMUST00000071703ENSMUSG00000052957ENSMUST00000065086ENSMUSG00000089875ENSMUST00000162450ENSMUST00000163053
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000YF_0001ENSG00000083223ENST00000277141ENST00000375957ENST00000375960ENST00000375963ENSG00000180447ENST00000298743ENSG00000214908ENST00000422735ENSG00000232211ENST00000443163ENSG00000235819ENST00000438582CIL_0000YF_0002ENSMUSG00000035248ENSMUST00000071703ENSMUSG00000052957ENSMUST00000065086ENSMUSG00000089875ENSMUST00000162450ENSMUST00000163053
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000083223 ENST00000277141 0.827±0.00 0.381±0.00 0.721±0.00 0.260±0.00 N/A 1.136±0.00 0.559±0.00 2.177±0.00 0.384±0.00 1.510±0.00 0.139±0.00 1.070±0.17 1.247±0.00 0.804±0.20
ENST00000375947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000375948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000375957 N/A 1.759±0.00 N/A 0.526±0.00 0.918±0.00 0.773±0.00 N/A 1.382±0.00 N/A N/A 0.719±0.40 6.660±3.52 2.877±2.04 1.972±0.72
ENST00000375960 N/A N/A 1.040±0.00 0.589±0.28 0.803±0.00 0.848±0.00 N/A 0.514±0.00 N/A N/A 0.814±0.49 N/A N/A N/A
ENST00000375963 2.082±0.00 1.146±0.00 N/A 0.808±0.20 2.063±0.25 0.863±0.02 1.273±0.00 1.997±0.98 0.978±0.00 1.016±0.00 1.715±0.00 1.849±0.45 1.033±0.03 2.550±0.82
ENST00000469004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180447 ENST00000298743 11.919±0.00 7.334±0.00 0.977±0.00 1.445±0.33 11.292±6.61 7.586±4.81 4.531±2.65 5.898±5.75 1.205±0.32 2.831±0.64 4.240±0.69 18.210±16.08 33.283±12.94 8.943±7.91
ENSG00000214908 ENST00000422735 0.105±0.00 0.074±0.00 N/A N/A 0.092±0.00 0.085±0.00 N/A 0.018±0.00 0.016±0.00 0.069±0.00 0.081±0.00 0.127±0.00 N/A 0.029±0.00
ENSG00000232211 ENST00000443163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.00
ENSG00000235819 ENST00000438582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.525±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035248 ENSMUST00000071703 5.813±3.47 3.751±0.35 5.190±0.03 9.963±0.84 5.201±2.01 6.135±2.59 2.750±0.90 4.810±1.87 10.773±4.69 6.347±1.54 1.998±1.56 6.341±1.81 7.304±4.76 5.024±0.49
ENSMUSG00000052957 ENSMUST00000065086 83.138±53.83 55.966±9.56 78.416±18.36 11.726±8.09 28.615±15.38 32.987±3.29 8.530±1.34 16.863±3.79 5.675±4.02 24.932±5.66 4.238±0.74 133.424±62.18 5.236±6.04 1.670±0.96
ENSMUSG00000089875 ENSMUST00000162450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.395±0.17 N/A 3.365±0.87
ENSMUST00000163053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.601±0.30

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