C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hippocalcin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071858 Hpcal1-201 ENSMUSG00000071379 10090 + 12:17690814-17791926 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071858
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071858 29.108±4.55 15.543±1.67 18.188±2.36 28.323±5.30 26.467±9.70 59.247±7.42 11.963±1.56 41.447±6.66 12.083±5.57 71.040±8.17 2.036±0.39 32.391±12.64 14.887±6.54 5.372±2.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0007165 IEA signal transduction
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307845 HPCAL1-001 protein_coding Homo_sapiens 0 893
ENST00000373467 HPCA-001 protein_coding Homo_sapiens 0 608
ENST00000381765 HPCAL1-002 protein_coding Homo_sapiens 0 893
ENST00000419810 HPCAL1-003 nonsense_mediated_decay Homo_sapiens 0 715
ENST00000480118 HPCA-005 processed_transcript Homo_sapiens 0 536
ENST00000613496 HPCAL1-201 protein_coding Homo_sapiens 0 893
ENST00000620771 HPCAL1-202 protein_coding Homo_sapiens 0 893
ENST00000622018 HPCAL1-203 protein_coding Homo_sapiens 0 893

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