C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: hippocalcin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419810 HPCAL1-003 ENSG00000115756 9606 + 2:10324347-10427352 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartOvaryENST00000419810
Transcript ID Heart Ovary
ENST00000419810 0.049±0.00 0.626±0.44

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071858 Hpcal1-201 protein_coding Mus_musculus 0 715
ENSMUST00000164649 Hpca-202 protein_coding Mus_musculus 0 608
ENSMUST00000030572 Hpca-201 protein_coding Mus_musculus 0 608
ENSMUST00000125931 Hpca-006 protein_coding Mus_musculus 0 608
ENSMUST00000139450 Hpca-007 protein_coding Mus_musculus 0 608
ENSMUST00000116442 Hpca-005 protein_coding Mus_musculus 0 608
ENSMUST00000116444 Hpca-001 protein_coding Mus_musculus 0 608
ENSMUST00000095807 Hpca-002 protein_coding Mus_musculus 0 608
ENSMUST00000149763 Hpca-003 protein_coding Mus_musculus 0 606
ENSMUST00000174403 Gm20472-001 unprocessed_pseudogene Mus_musculus 0 540
ENSDART00000137236 HPCAL1-001 protein_coding Danio_rerio 0 510
ENSDART00000028471 HPCAL1-201 protein_coding Danio_rerio 0 508
ENSMUST00000174304 Gm5977-001 transcribed_unprocessed_pseudogene Mus_musculus 0 472
ENSMUST00000072299 Vsnl1-201 protein_coding Mus_musculus 0 244

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