C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elaC homolog 2 (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071891 Elac2-001 ENSMUSG00000020549 10090 + 11:64979038-65002069 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaENSMUST00000071891
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta
ENSMUST00000071891 2.527±0.19 6.942±1.89 2.099±0.40 4.475±0.58 3.213±0.93 3.753±0.46 2.654±0.58 3.457±0.95 1.686±0.11 5.105±1.43 3.420±1.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DU CIL_0008DU_0002 VISTA 11:64598596-65200939
CIL_0008QC CIL_0008QC_0002 VISTA 11:64908855-65510457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004519 IEA endonuclease activity
GO:0005634 ISS nucleus
GO:0005739 IDA mitochondrion
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0072684 ISS mitochondrial tRNA 3'-trailer cleavage, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338034 ELAC2-001 protein_coding Homo_sapiens 0 2128
ENST00000395962 ELAC2-002 protein_coding Homo_sapiens 0 1978
ENST00000426905 ELAC2-012 protein_coding Homo_sapiens 0 1685
ENST00000446899 ELAC2-007 protein_coding Homo_sapiens 0 721
ENST00000465825 ELAC2-006 retained_intron Homo_sapiens 0 822
ENST00000480891 ELAC2-004 retained_intron Homo_sapiens 0 1666
ENST00000484122 ELAC2-003 retained_intron Homo_sapiens 0 1182
ENST00000487229 ELAC2-014 retained_intron Homo_sapiens 0 1410
ENST00000491478 ELAC2-011 retained_intron Homo_sapiens 0 440
ENST00000580504 ELAC2-020 protein_coding Homo_sapiens 0 344
ENST00000581499 ELAC2-017 protein_coding Homo_sapiens 0 379
ENST00000583371 ELAC2-016 protein_coding Homo_sapiens 0 377
ENST00000584650 ELAC2-013 protein_coding Homo_sapiens 0 1371
ENST00000609101 ELAC2-021 protein_coding Homo_sapiens 0 595
ENST00000609345 ELAC2-023 processed_transcript Homo_sapiens 0 604
ENST00000609757 ELAC2-022 protein_coding Homo_sapiens 0 381

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