C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vaccinia related kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072040 Vrk1-202 ENSMUSG00000021115 10090 + 12:106010263-106077410 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000072040
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000072040 1.392±0.94 1.250±0.26 1.278±0.25 2.788±1.61 1.232±0.56 1.483±0.24 0.499±0.13 0.718±0.34 3.370±2.48 1.860±0.84 0.335±0.09 2.321±1.08 3.625±1.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HJ CIL_0003HJ_0002 CGP 12:105784694-106077410
CIL_0007JE CIL_0007JE_0002 UCNEbase 12:105838681-106687937

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005795 ISS Golgi stack
GO:0005856 IEA cytoskeleton
GO:0006468 IDA protein phosphorylation
GO:0007067 IEA mitotic nuclear division
GO:0046777 IDA protein autophosphorylation
GO:0090166 ISS Golgi disassembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216639 VRK1-001 protein_coding Homo_sapiens 0 1251
ENST00000555351 VRK1-002 retained_intron Homo_sapiens 0 586
ENST00000557222 VRK1-003 protein_coding Homo_sapiens 0 660
ENST00000557352 VRK1-006 protein_coding Homo_sapiens 0 387

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