C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0003HJ_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000090060-ENSG00000100749 | CGP | 9606 | 14:96501433-96931722  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000090060  (PAPOLA)poly(A) polymerase alpha |
ENST00000216277 (PAPOLA-001)
|
96502373-96567111 | protein_coding | |
|
ENST00000392990 (PAPOLA-005)
|
96502558-96565428 | protein_coding | ||
|
ENST00000553357 (PAPOLA-011)
|
96502382-96532338 | nonsense_mediated_decay | ||
|
ENST00000553461 (PAPOLA-025)
|
96527442-96534889 | protein_coding | ||
|
ENST00000553689 (PAPOLA-003)
|
96502398-96565048 | nonsense_mediated_decay | ||
|
ENST00000553940 (PAPOLA-021)
|
96560438-96565059 | retained_intron | ||
|
ENST00000554130 (PAPOLA-012)
|
96502412-96531728 | processed_transcript | ||
|
ENST00000554135 (PAPOLA-019)
|
96547688-96552983 | retained_intron | ||
|
ENST00000554666 (PAPOLA-026)
|
96536895-96547904 | retained_intron | ||
|
ENST00000554887 (PAPOLA-010)
|
96501433-96527496 | processed_transcript | ||
|
ENST00000555021 (PAPOLA-016)
|
96535525-96537047 | retained_intron | ||
|
ENST00000555131 (PAPOLA-015)
|
96534223-96537059 | retained_intron | ||
|
ENST00000555224 (PAPOLA-024)
|
96521063-96532696 | retained_intron | ||
|
ENST00000555508 (PAPOLA-022)
|
96562458-96565106 | retained_intron | ||
|
ENST00000555626 (PAPOLA-006)
|
96502851-96564988 | protein_coding | ||
|
ENST00000555701 (PAPOLA-009)
|
96542182-96553532 | retained_intron | ||
|
ENST00000555912 (PAPOLA-007)
|
96525981-96531725 | retained_intron | ||
|
ENST00000556248 (PAPOLA-014)
|
96504289-96521072 | processed_transcript | ||
|
ENST00000556283 (PAPOLA-018)
|
96542729-96555950 | retained_intron | ||
|
ENST00000556459 (PAPOLA-020)
|
96547896-96565407 | protein_coding | ||
|
ENST00000556619 (PAPOLA-013)
|
96502542-96528002 | protein_coding | ||
|
ENST00000556787 (PAPOLA-017)
|
96541907-96552543 | retained_intron | ||
|
ENST00000557320 (PAPOLA-002)
|
96502401-96534885 | protein_coding | ||
|
ENST00000557406 (PAPOLA-023)
|
96521016-96531731 | retained_intron | ||
|
ENST00000557471 (PAPOLA-004)
|
96502441-96532248 | protein_coding | ||
|
ENSG00000100749 (VRK1) vaccinia related kinase 1 |
ENST00000216639 (VRK1-001)
|
96797304-96881613 | protein_coding | |
|
ENST00000553683 (VRK1-005)
|
96876029-96881259 | protein_coding | ||
|
ENST00000555067 (VRK1-004)
|
96858909-96881391 | processed_transcript | ||
|
ENST00000555351 (VRK1-002)
|
96797385-96853055 | retained_intron | ||
|
ENST00000555402 (VRK1-007)
|
96877390-96881407 | processed_transcript | ||
|
ENST00000557222 (VRK1-003)
|
96852888-96931722 | protein_coding | ||
|
ENST00000557352 (VRK1-006)
|
96855304-96860922 | protein_coding | ||
|
ENSG00000223299 (RN7SKP108) RNA, 7SK small nuclear pseudogene 108 |
ENST00000411367 (RN7SKP108-201)
|
96638187-96638514 | misc_RNA | |
|
ENSG00000258702 (RP11-433J8.1) |
ENST00000553378 (RP11-433J8.1-002)
|
96592733-96595762 | lincRNA | |
|
ENST00000555496 (RP11-433J8.1-001)
|
96592768-96594760 | lincRNA | ||
|
ENSG00000258979 (RP11-433J8.2) |
ENST00000556669 (RP11-433J8.2-001)
|
96741191-96790613 | lincRNA | |
|
ENSG00000276182 (RP11-872J21.5) |
ENST00000618976 (RP11-872J21.5-001)
|
96537170-96537904 | sense_intronic | |
| CIL_0003HJ_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000021111-ENSMUSG00000021115 | CGP | 10090 | 12:105784694-106077410 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000021115 (Vrk1) vaccinia related kinase 1 |
ENSMUST00000021539 (Vrk1-201)
|
106010263-106077410 | protein_coding | |
|
ENSMUST00000072040 (Vrk1-202)
|
106010263-106077410 | protein_coding | ||
|
ENSMUST00000085026 (Vrk1-203)
|
106010263-106077410 | protein_coding | ||
Expression Patterns
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