C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072119 Ccnb1-001 ENSMUSG00000041431 10090 - 13:100778650-100786570 protein_coding

Mus musculus EnsemblGRCm38

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072119
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072119 1.083±0.86 0.189±0.10 1.130±0.04 11.233±0.49 0.318±0.25 1.360±0.85 0.112±0.01 0.108±0.05 58.730±27.68 0.165±0.01 0.098±0.00 3.099±1.76 20.040±20.39 8.093±2.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SS CIL_0002SS_0002 CGP 13:100778650-100833427

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000278 IEA mitotic cell cycle
GO:0000922 IEA spindle pole
GO:0000942 IEA condensed nuclear chromosome outer kinetochore
GO:0001556 IEA oocyte maturation
GO:0001701 IMP in utero embryonic development
GO:0001933 IEA negative regulation of protein phosphorylation
GO:0005113 IEA patched binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 ISS centrosome
GO:0006461 IEA protein complex assembly
GO:0006468 IDA protein phosphorylation
GO:0007080 IEA mitotic metaphase plate congression
GO:0007283 IEA spermatogenesis
GO:0009612 IEA response to mechanical stimulus
GO:0009636 IEA response to toxic substance
GO:0010629 IEA negative regulation of gene expression
GO:0016020 IDA membrane
GO:0016301 IDA kinase activity
GO:0016572 IEA histone phosphorylation
GO:0031442 IEA positive regulation of mRNA 3'-end processing
GO:0033129 IEA positive regulation of histone phosphorylation
GO:0035173 IEA histone kinase activity
GO:0042246 IEA tissue regeneration
GO:0042493 IEA response to drug
GO:0043148 IEA mitotic spindle stabilization
GO:0045787 IDA positive regulation of cell cycle
GO:0045931 IEA positive regulation of mitotic cell cycle
GO:0046680 IEA response to DDT
GO:0048146 IMP positive regulation of fibroblast proliferation
GO:0048565 IEA digestive tract development
GO:0051987 IEA positive regulation of attachment of spindle microtubules to kinetochore
GO:0055015 IEA ventricular cardiac muscle cell development
GO:0060045 IEA positive regulation of cardiac muscle cell proliferation
GO:0060623 IEA regulation of chromosome condensation
GO:0071174 IEA mitotic spindle checkpoint
GO:0071283 IEA cellular response to iron(III) ion
GO:0071398 IEA cellular response to fatty acid
GO:0071407 IEA cellular response to organic cyclic compound
GO:0071456 IEA cellular response to hypoxia
GO:2000775 IDA histone H3-S10 phosphorylation involved in chromosome condensation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256442 CCNB1-001 protein_coding Homo_sapiens 0 1264
ENST00000506572 CCNB1-003 protein_coding Homo_sapiens 0 1160
ENST00000507798 CCNB1-006 protein_coding Homo_sapiens 3.00018e-42 176
ENST00000513102 CCNB1-007 retained_intron Homo_sapiens 0 211

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