C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000256442 CCNB1-001 ENSG00000134057 9606 + 5:69167010-69178245 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000256442
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000256442 0.276±0.00 0.699±0.23 0.874±0.48 1.448±0.96 0.087±0.01 0.833±0.00 0.065±0.00 0.690±0.00 0.102±0.00 2.698±1.25 3.129±1.55 2.732±1.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0000922 IDA spindle pole
GO:0000942 IDA condensed nuclear chromosome outer kinetochore
GO:0001556 IEA oocyte maturation
GO:0001701 IEA in utero embryonic development
GO:0001933 IEA negative regulation of protein phosphorylation
GO:0005113 IPI patched binding
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0006461 IEA protein complex assembly
GO:0006468 IEA protein phosphorylation
GO:0007077 TAS mitotic nuclear envelope disassembly
GO:0007080 IMP mitotic metaphase plate congression
GO:0007283 IEA spermatogenesis
GO:0009612 IEA response to mechanical stimulus
GO:0009636 IEA response to toxic substance
GO:0010629 IEA negative regulation of gene expression
GO:0016020 IEA membrane
GO:0016301 IEA kinase activity
GO:0016572 IEA histone phosphorylation
GO:0019901 IPI:IEA protein kinase binding
GO:0031145 TAS anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031442 IEA positive regulation of mRNA 3'-end processing
GO:0033129 IEA positive regulation of histone phosphorylation
GO:0035173 IEA histone kinase activity
GO:0042246 IEA tissue regeneration
GO:0042493 IEA response to drug
GO:0043148 IMP mitotic spindle stabilization
GO:0045787 IEA positive regulation of cell cycle
GO:0045931 IMP positive regulation of mitotic cell cycle
GO:0046680 IEA response to DDT
GO:0048146 IEA positive regulation of fibroblast proliferation
GO:0048565 IEA digestive tract development
GO:0051437 TAS positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051439 TAS regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051726 TAS:IEA regulation of cell cycle
GO:0051987 IMP positive regulation of attachment of spindle microtubules to kinetochore
GO:0055015 IEA ventricular cardiac muscle cell development
GO:0060045 IEA positive regulation of cardiac muscle cell proliferation
GO:0060623 IEA regulation of chromosome condensation
GO:0071174 IMP mitotic spindle checkpoint
GO:0071283 IEA cellular response to iron(III) ion
GO:0071398 IEA cellular response to fatty acid
GO:0071407 IEA cellular response to organic cyclic compound
GO:0071456 IEA cellular response to hypoxia
GO:2000775 IEA histone H3-S10 phosphorylation involved in chromosome condensation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155338 Gm5593-001 processed_pseudogene Mus_musculus 0 1266
ENSMUST00000072119 Ccnb1-001 protein_coding Mus_musculus 0 1264
ENSMUST00000119471 Gm12856-001 unprocessed_pseudogene Mus_musculus 0 1212
ENSMUST00000134080 Ccnb1-006 retained_intron Mus_musculus 0 845
ENSMUST00000091295 Ccnb1-002 protein_coding Mus_musculus 0 843
ENSMUST00000147790 Ccnb1-003 retained_intron Mus_musculus 0 211

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