C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POC1 centriolar protein homolog A (Chlamydomonas)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072206 Poc1a-002 ENSMUSG00000023345 10090 + 9:106281061-106349879 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072206
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072206 3.396±0.72 3.084±0.67 0.943±0.04 4.224±1.46 2.447±0.36 7.820±2.38 1.644±0.45 2.109±0.39 7.362±6.89 2.145±0.20 0.736±0.19 5.831±2.85 5.809±3.59 34.106±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 ISS spindle pole
GO:0003674 ND molecular_function
GO:0005813 IEA centrosome
GO:0005814 ISS centriole
GO:0008150 ND biological_process
GO:0030030 IEA cell projection organization
GO:0036064 ISS ciliary basal body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296484 POC1A-001 protein_coding Homo_sapiens 0 1587
ENST00000394970 POC1A-002 protein_coding Homo_sapiens 0 1319
ENST00000474012 POC1A-003 protein_coding Homo_sapiens 0 1567

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