C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POC1 centriolar protein A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000474012 POC1A-003 ENSG00000164087 9606 - 3:52075454-52154404 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryTestisENST00000474012
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Testis
ENST00000474012 0.391±0.00 0.379±0.00 0.119±0.04 0.493±0.14 0.600±0.15 0.168±0.15 0.260±0.00 0.631±0.00 1.332±0.00 3.599±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087C CIL_00087C_0001 VISTA 3:51705330-52307529
CIL_0008NT CIL_0008NT_0001 VISTA 3:51738719-52342071

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IDA spindle pole
GO:0005515 IPI:IEA protein binding
GO:0005813 IDA centrosome
GO:0005814 IDA centriole
GO:0030030 IEA cell projection organization
GO:0036064 IDA ciliary basal body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072206 Poc1a-002 protein_coding Mus_musculus 0 1567
ENSMUST00000191434 Poc1a-005 protein_coding Mus_musculus 0 1249
ENSMUST00000188660 Poc1a-001 processed_transcript Mus_musculus 0 636
ENSMUST00000189325 Poc1a-004 processed_transcript Mus_musculus 0 460
ENSMUST00000186366 Poc1a-003 processed_transcript Mus_musculus 0 316

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