C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sortilin-related VPS10 domain containing receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612154 SORCS1-202 ENSG00000108018 9606 - 10:106573671-106956583 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverOvaryPlacentaTestisENST00000612154
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000612154 0.094±0.00 0.102±0.00 0.026±0.00 1.425±0.00 0.692±0.00 0.297±0.00 0.214±0.00 0.039±0.00 0.351±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000392 CIL_000392_0002 CGP 10:104641101-107164534

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111756 Sorcs1-202 protein_coding Mus_musculus 0 3699
ENSMUST00000164039 Sorcs1-203 protein_coding Mus_musculus 0 3487
ENSMUST00000072685 Sorcs1-201 protein_coding Mus_musculus 0 3483
ENSMUST00000168357 Sorcs1-204 protein_coding Mus_musculus 0 3304
ENSMUST00000078880 Sorcs3-201 protein_coding Mus_musculus 0 857

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