C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: armadillo repeat containing 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072896 Armc10-001 ENSMUSG00000038525 10090 + 5:21645879-21662694 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072896
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072896 23.274±13.11 28.795±5.49 14.872±1.23 26.984±17.50 20.074±6.21 18.952±3.95 4.983±0.68 14.081±1.08 6.390±2.09 18.537±1.10 1.572±0.24 37.524±17.98 12.678±1.86 2.142±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0002 VISTA 5:21195900-21797355
CIL_0005CL CIL_0005CL_0002 CGP 5:21543527-21662694
CIL_0005CI CIL_0005CI_0002 CGP 5:21645813-21701396

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0040008 IEA regulation of growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306450 ARMC10-005 nonsense_mediated_decay Homo_sapiens 0 592
ENST00000313754 ARMC10P1-001 processed_pseudogene Homo_sapiens 0 453
ENST00000323716 ARMC10-001 protein_coding Homo_sapiens 0 691
ENST00000323735 ARMC10-006 nonsense_mediated_decay Homo_sapiens 0 278
ENST00000425331 ARMC10-201 protein_coding Homo_sapiens 0 460
ENST00000428183 ARMC10-002 protein_coding Homo_sapiens 0 278
ENST00000431642 ARMC10-008 protein_coding Homo_sapiens 0 265
ENST00000434153 ARMC10-007 protein_coding Homo_sapiens 8.00141e-43 178
ENST00000441711 ARMC10-003 protein_coding Homo_sapiens 0 776
ENST00000454559 ARMC10-004 protein_coding Homo_sapiens 0 363
ENST00000541300 ARMC10-202 protein_coding Homo_sapiens 0 363

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