C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier protein family 52, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073228 Slc52a3-001 ENSMUSG00000027463 10090 + 2:151996535-152009258 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000073228
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000073228 2.956±1.11 1.809±0.68 5.545±0.79 0.274±0.10 3.136±0.73 24.350±3.15 0.584±0.20 3.410±0.63 0.318±0.25 8.043±2.44 0.312±0.11 2.899±1.30 10.190±11.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PI CIL_0000PI_0002 CGP 2:151996511-152095802

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005887 ISS integral component of plasma membrane
GO:0007605 ISS sensory perception of sound
GO:0032217 ISS riboflavin transporter activity
GO:0032218 ISS riboflavin transport
GO:0034605 IDA cellular response to heat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217254 SLC52A3-001 protein_coding Homo_sapiens 0 861
ENST00000381944 SLC52A3-004 protein_coding Homo_sapiens 0 706
ENST00000473664 SLC52A3-002 processed_transcript Homo_sapiens 0 479

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