C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Eph receptor A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073387 Epha1-201 ENSMUSG00000029859 10090 - 6:42358487-42373268 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyLiverLungOvaryPlacentaENSMUST00000073387
Transcript ID Bladder Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000073387 14.794±0.95 14.296±1.04 8.924±1.03 10.902±4.70 17.035±0.83 3.572±0.00 8.500±2.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074Q CIL_00074Q_0002 CGP 6:42315312-42360146
CIL_00074P CIL_00074P_0002 CGP 6:42349828-42373268

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001954 ISS positive regulation of cell-matrix adhesion
GO:0004672 ISS protein kinase activity
GO:0005005 ISS transmembrane-ephrin receptor activity
GO:0005524 IEA ATP binding
GO:0005887 ISS integral component of plasma membrane
GO:0006469 ISS negative regulation of protein kinase activity
GO:0007166 ISS cell surface receptor signaling pathway
GO:0008284 ISS positive regulation of cell proliferation
GO:0018108 ISS peptidyl-tyrosine phosphorylation
GO:0019901 IEA protein kinase binding
GO:0030335 ISS positive regulation of cell migration
GO:0030336 ISS negative regulation of cell migration
GO:0032314 ISS regulation of Rac GTPase activity
GO:0032862 ISS activation of Rho GTPase activity
GO:0034446 ISS substrate adhesion-dependent cell spreading
GO:0045766 ISS positive regulation of angiogenesis
GO:0046777 ISS protein autophosphorylation
GO:0048013 IEA ephrin receptor signaling pathway
GO:0051496 IDA positive regulation of stress fiber assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275815 EPHA1-001 protein_coding Homo_sapiens 0 3158
ENST00000465208 EPHA1-006 retained_intron Homo_sapiens 0 737
ENST00000488068 EPHA1-002 retained_intron Homo_sapiens 0 1240
ENST00000494989 EPHA1-005 retained_intron Homo_sapiens 0 708
ENST00000497891 EPHA1-003 retained_intron Homo_sapiens 0 409

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