C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thrombospondin, type I, domain containing 7B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073527 Thsd7b-001 ENSMUSG00000042581 10090 + 1:129273344-130219278 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000073527
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000073527 0.086±0.03 0.063±0.02 1.429±0.61 0.033±0.00 0.031±0.01 0.008±0.00 0.018±0.01 0.049±0.00 0.045±0.01 0.235±0.10 0.003±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VZ CIL_0006VZ_0002 CGP 1:128588199-130219278

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272643 THSD7B-201 protein_coding Homo_sapiens 0 5956
ENST00000409968 THSD7B-001 protein_coding Homo_sapiens 0 6157
ENST00000413152 THSD7B-202 protein_coding Homo_sapiens 0 5829
ENST00000472720 THSD7B-002 nonsense_mediated_decay Homo_sapiens 0 313
ENST00000480352 THSD7B-004 retained_intron Homo_sapiens 0 305

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