C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nascent polypeptide-associated complex alpha polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073868 Naca-201 ENSMUSG00000061315 10090 + 10:128035346-128048637 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073868
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073868 73.149±5.64 65.876±6.24 116.046±3.77 135.865±37.89 43.528±9.66 81.014±14.35 38.481±1.12 80.096±8.45 120.320±84.75 41.001±0.21 33.967±0.00 218.339±130.45 300.100±176.08 152.707±96.97

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003231 IMP cardiac ventricle development
GO:0003677 IEA DNA binding
GO:0003713 IDA transcription coactivator activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0010664 IMP negative regulation of striated muscle cell apoptotic process
GO:0015031 IEA protein transport
GO:0017025 IDA TBP-class protein binding
GO:0043403 IMP skeletal muscle tissue regeneration
GO:0048633 IMP positive regulation of skeletal muscle tissue growth
GO:0048742 IMP regulation of skeletal muscle fiber development
GO:0051451 IMP myoblast migration
GO:0061384 IMP heart trabecula morphogenesis
GO:1901227 IMP negative regulation of transcription from RNA polymerase II promoter involved in heart development
GO:1901228 IMP positive regulation of transcription from RNA polymerase II promoter involved in heart development
GO:2000138 IMP positive regulation of cell proliferation involved in heart morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318548 NACAP2-001 processed_pseudogene Homo_sapiens 0 665
ENST00000356769 NACA-001 protein_coding Homo_sapiens 0 1005
ENST00000359690 NACA3P-001 processed_pseudogene Homo_sapiens 0 749
ENST00000393891 NACA-003 protein_coding Homo_sapiens 0 876
ENST00000419462 NACAP1-001 processed_transcript Homo_sapiens 0 830
ENST00000454682 NACA-201 protein_coding Homo_sapiens 0 765
ENST00000519039 NACAP1-002 transcribed_processed_pseudogene Homo_sapiens 0 713
ENST00000521764 NACA2-001 protein_coding Homo_sapiens 0 737
ENST00000546392 NACA-005 protein_coding Homo_sapiens 0 843
ENST00000546410 NACA-017 retained_intron Homo_sapiens 0 327
ENST00000546862 NACA-012 protein_coding Homo_sapiens 0 547
ENST00000546917 NACA-006 protein_coding Homo_sapiens 4e-27 124
ENST00000547914 NACA-015 nonsense_mediated_decay Homo_sapiens 0 518
ENST00000548084 NACA-013 nonsense_mediated_decay Homo_sapiens 0 189
ENST00000548386 NACA-016 processed_transcript Homo_sapiens 0 387
ENST00000548563 NACA-011 protein_coding Homo_sapiens 0 804
ENST00000549259 NACA-007 protein_coding Homo_sapiens 0 752
ENST00000549855 NACA-020 protein_coding Homo_sapiens 0 612
ENST00000550920 NACA-018 protein_coding Homo_sapiens 0 767
ENST00000550952 NACA-004 protein_coding Homo_sapiens 0 765
ENST00000551520 NACA-009 retained_intron Homo_sapiens 0 239
ENST00000551775 NACA-010 processed_transcript Homo_sapiens 0 313
ENST00000551793 NACA-008 processed_transcript Homo_sapiens 0 326
ENST00000552055 NACA-014 protein_coding Homo_sapiens 0 536
ENST00000552100 NACAP3-001 processed_pseudogene Homo_sapiens 0 531
ENST00000552540 NACA-002 protein_coding Homo_sapiens 0 876

Loading