C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nascent-polypeptide-associated complex alpha polypeptide pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519039 NACAP1-002 ENSG00000228224 9606 + 8:101368910-101369550 transcribed_processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyMuscleOvaryPlacentaTestisENST00000519039
Transcript ID Colon Kidney Muscle Ovary Placenta Testis
ENST00000519039 0.102±0.00 0.009±0.00 0.062±0.00 0.704±0.00 0.130±0.00 2.904±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088H CIL_00088H_0001 VISTA 8:100960984-101568585
CIL_000532 CIL_000532_0002 CGP 8:101177878-101669726

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073868 Naca-201 protein_coding Mus_musculus 0 713
ENSMUST00000052882 Gm6863-201 processed_pseudogene Mus_musculus 0 693
ENSMUST00000092048 Naca-202 protein_coding Mus_musculus 0 628
ENSMUST00000120435 Gm12482-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000189789 RP23-149C6.3-001 processed_pseudogene Mus_musculus 0 556

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