C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nascent polypeptide-associated complex alpha subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546392 NACA-005 ENSG00000196531 9606 - 12:56712504-56725354 protein_coding

Homo sapiens EnsemblGRCh38

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000546392
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000546392 160.158±0.00 141.295±0.00 60.620±11.88 105.790±50.71 123.034±94.73 18.127±0.00 167.594±0.00 122.201±72.28 165.451±130.87 687.043±342.84 173.550±106.04 193.648±7.94

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003231 ISS cardiac ventricle development
GO:0003677 IEA DNA binding
GO:0003713 ISS transcription coactivator activity
GO:0005515 IPI:IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005854 TAS nascent polypeptide-associated complex
GO:0006351 IEA transcription, DNA-templated
GO:0006412 TAS translation
GO:0010664 ISS negative regulation of striated muscle cell apoptotic process
GO:0015031 IEA protein transport
GO:0016032 IEA viral process
GO:0017025 ISS TBP-class protein binding
GO:0043403 ISS skeletal muscle tissue regeneration
GO:0048633 ISS positive regulation of skeletal muscle tissue growth
GO:0048742 ISS regulation of skeletal muscle fiber development
GO:0061384 ISS heart trabecula morphogenesis
GO:0070062 IDA extracellular vesicular exosome
GO:1901227 ISS negative regulation of transcription from RNA polymerase II promoter involved in heart development
GO:1901228 ISS positive regulation of transcription from RNA polymerase II promoter involved in heart development
GO:2000138 ISS positive regulation of cell proliferation involved in heart morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073868 Naca-201 protein_coding Mus_musculus 0 843
ENSMUST00000052882 Gm6863-201 processed_pseudogene Mus_musculus 0 811
ENSMUST00000092048 Naca-202 protein_coding Mus_musculus 0 730
ENSMUST00000120435 Gm12482-001 processed_pseudogene Mus_musculus 0 710
ENSMUST00000189789 RP23-149C6.3-001 processed_pseudogene Mus_musculus 0 695

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