C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10094
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074053 Gm10094-201 ENSMUSG00000061104 10090 + 8:95825354-95826133 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074053
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074053 2.723±0.88 3.229±1.25 2.403±0.55 4.209±2.65 2.121±0.84 1.872±0.59 1.508±0.74 2.011±0.33 3.052±2.09 1.689±0.33 0.422±0.18 4.407±2.11 4.473±0.65 2.167±0.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000381 ISS regulation of alternative mRNA splicing, via spliceosome
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0016607 ISS nuclear speck
GO:0043065 ISS positive regulation of apoptotic process
GO:0048025 ISS negative regulation of mRNA splicing, via spliceosome
GO:0061574 ISS ASAP complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382533 SAP18-001 protein_coding Homo_sapiens 0 889
ENST00000434334 AC013733.5-001 processed_pseudogene Homo_sapiens 0 444
ENST00000450573 SAP18-008 protein_coding Homo_sapiens 0 464
ENST00000467636 SAP18-005 protein_coding Homo_sapiens 0 593
ENST00000471009 SAP18-007 processed_transcript Homo_sapiens 0 385
ENST00000485646 SAP18-004 processed_transcript Homo_sapiens 0 246
ENST00000492245 SAP18-006 protein_coding Homo_sapiens 0 239
ENST00000607003 SAP18-009 protein_coding Homo_sapiens 0 841
ENST00000621421 SAP18-201 protein_coding Homo_sapiens 0 889

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