C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074654 Fgf9-002 ENSMUSG00000021974 10090 + 14:58075115-58110174 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverOvaryPlacentaTestisENSMUST00000074654
Transcript ID Adipose Brain Breast Colon Heart Liver Ovary Placenta Testis
ENSMUST00000074654 0.206±0.00 1.549±0.49 0.071±0.05 0.240±0.07 0.618±0.00 0.097±0.06 0.326±0.00 0.128±0.00 0.107±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MD CIL_0004MD_0002 CGP 14:57916280-58112337

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0001525 IDA angiogenesis
GO:0001649 IMP osteoblast differentiation
GO:0002053 IDA positive regulation of mesenchymal cell proliferation
GO:0002062 IGI chondrocyte differentiation
GO:0006606 IMP protein import into nucleus
GO:0007267 IMP cell-cell signaling
GO:0008284 IMP positive regulation of cell proliferation
GO:0008543 IMP fibroblast growth factor receptor signaling pathway
GO:0008584 IMP male gonad development
GO:0010628 IDA positive regulation of gene expression
GO:0030178 IGI negative regulation of Wnt signaling pathway
GO:0030238 IGI male sex determination
GO:0030324 IMP lung development
GO:0030326 IMP embryonic limb morphogenesis
GO:0030949 IMP positive regulation of vascular endothelial growth factor receptor signaling pathway
GO:0032927 IDA positive regulation of activin receptor signaling pathway
GO:0042472 IMP inner ear morphogenesis
GO:0045880 IDA positive regulation of smoothened signaling pathway
GO:0048505 IMP regulation of timing of cell differentiation
GO:0048566 IMP embryonic digestive tract development
GO:0048706 IMP embryonic skeletal system development
GO:0050679 IDA positive regulation of epithelial cell proliferation
GO:0060045 IGI positive regulation of cardiac muscle cell proliferation
GO:0060484 IMP lung-associated mesenchyme development
GO:0090263 IMP positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382353 FGF9-001 protein_coding Homo_sapiens 0 767
ENST00000461657 FGF9-002 processed_transcript Homo_sapiens 0 453
ENST00000478546 FGF9-003 processed_transcript Homo_sapiens 0 595

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