C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074733 Sept11-201 ENSMUSG00000058013 10090 + 5:93093457-93174958 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074733
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074733 18.843±4.78 2.967±0.82 8.113±1.39 30.285±18.26 17.133±5.22 8.538±0.92 5.289±0.40 22.019±3.54 6.648±4.48 23.208±1.69 4.512±1.05 19.517±8.03 24.852±12.15 0.799±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WJ CIL_0008WJ_0002 VISTA 5:92697267-93298294
CIL_0008OK CIL_0008OK_0002 VISTA 5:92831077-93435726
CIL_00069X CIL_00069X_0002 CGP 5:93093457-93206495

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001725 IEA stress fiber
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0007049 IEA cell cycle
GO:0030054 IEA cell junction
GO:0031105 IEA septin complex
GO:0042995 IEA cell projection
GO:0045202 IEA synapse
GO:0051291 IEA protein heterooligomerization
GO:0051301 IEA cell division
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109620 sept8a-001 protein_coding Danio_rerio 0 728
ENSDART00000099622 sept10-001 protein_coding Danio_rerio 0 647
ENSDART00000007982 sept10-201 protein_coding Danio_rerio 0 636
ENSDART00000139668 sept8a-002 protein_coding Danio_rerio 0 370
ENST00000264893 SEPT11-001 protein_coding Homo_sapiens 0 1864
ENST00000502584 SEPT11-006 protein_coding Homo_sapiens 0 1622
ENST00000504460 SEPT11-016 processed_transcript Homo_sapiens 0 429
ENST00000504637 SEPT11-008 protein_coding Homo_sapiens 0 420
ENST00000505788 SEPT11-002 protein_coding Homo_sapiens 0 1585
ENST00000506047 SEPT11-003 retained_intron Homo_sapiens 0 514
ENST00000510515 SEPT11-004 protein_coding Homo_sapiens 0 1659
ENST00000510641 SEPT11-005 protein_coding Homo_sapiens 0 1362
ENST00000512333 SEPT11-011 processed_transcript Homo_sapiens 0 636
ENST00000512778 SEPT11-009 protein_coding Homo_sapiens 0 451

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