C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial methionyl-tRNA formyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074792 Mtfmt-001 ENSMUSG00000059183 10090 + 9:65435782-65453054 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074792
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074792 1.474±0.36 1.409±0.26 3.136±0.17 2.898±0.80 1.786±0.58 2.443±0.81 0.650±0.14 2.966±1.05 1.622±0.74 0.761±0.03 1.258±0.31 1.430±0.47 2.905±0.37 1.004±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0002 VISTA 9:65081642-65684657

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004479 IEA methionyl-tRNA formyltransferase activity
GO:0005739 IDA mitochondrion
GO:0006413 IEA translational initiation
GO:0071951 IEA conversion of methionyl-tRNA to N-formyl-methionyl-tRNA

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220058 MTFMT-001 protein_coding Homo_sapiens 0 1122
ENST00000543678 MTFMT-002 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000558460 MTFMT-003 nonsense_mediated_decay Homo_sapiens 0 1122
ENST00000560717 MTFMT-005 nonsense_mediated_decay Homo_sapiens 0 652

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