C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial methionyl-tRNA formyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000220058 MTFMT-001 ENSG00000103707 9606 - 15:65001512-65029627 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000220058
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000220058 0.179±0.00 0.724±0.00 0.169±0.00 0.976±0.00 0.571±0.25 0.473±0.04 0.841±0.00 0.525±0.18 0.282±0.00 0.380±0.03 1.265±0.73 0.419±0.05 0.534±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0001 VISTA 15:64785331-65389080

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004479 IEA methionyl-tRNA formyltransferase activity
GO:0005739 IEA mitochondrion
GO:0006413 IEA translational initiation
GO:0009058 IEA biosynthetic process
GO:0016742 IEA hydroxymethyl-, formyl- and related transferase activity
GO:0071951 IEA conversion of methionyl-tRNA to N-formyl-methionyl-tRNA

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074792 Mtfmt-001 protein_coding Mus_musculus 0 1122
ENSMUST00000132966 Mtfmt-002 retained_intron Mus_musculus 0 532
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000004 58
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000004 58

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