C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WW domain containing adaptor with coiled-coil
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074919 Wac-005 ENSMUSG00000024283 10090 + 18:7868850-7927067 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074919
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074919 13.585±2.70 11.909±1.97 14.051±1.27 12.491±6.86 17.727±7.82 7.896±2.09 5.836±1.79 11.321±2.03 9.444±3.22 12.169±2.27 5.558±0.43 14.055±3.76 14.474±6.90 12.093±3.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077T CIL_00077T_0003 CGP 18:7347962-7973547
CIL_0008UK CIL_0008UK_0002 VISTA 18:7743683-8345852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000993 ISS RNA polymerase II core binding
GO:0003682 ISS chromatin binding
GO:0005681 IDA spliceosomal complex
GO:0006351 IEA transcription, DNA-templated
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0010390 ISS histone monoubiquitination
GO:0044783 ISS G1 DNA damage checkpoint
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0071894 ISS histone H2B conserved C-terminal lysine ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345541 WAC-003 retained_intron Homo_sapiens 0 1570
ENST00000347934 WAC-006 protein_coding Homo_sapiens 0 2462
ENST00000354911 WAC-017 protein_coding Homo_sapiens 0 3847
ENST00000375646 WAC-001 protein_coding Homo_sapiens 0 1842
ENST00000375664 WAC-016 protein_coding Homo_sapiens 0 4012
ENST00000414108 WAC-012 protein_coding Homo_sapiens 0 1208
ENST00000420266 WAC-004 protein_coding Homo_sapiens 0 1103
ENST00000424454 WAC-005 nonsense_mediated_decay Homo_sapiens 0 1685
ENST00000428935 WAC-201 protein_coding Homo_sapiens 0 1663
ENST00000439676 WAC-018 nonsense_mediated_decay Homo_sapiens 0 1832
ENST00000442148 WAC-010 protein_coding Homo_sapiens 0 942
ENST00000448193 WAC-009 protein_coding Homo_sapiens 0 411
ENST00000472862 WAC-019 retained_intron Homo_sapiens 0 340
ENST00000476046 WAC-013 retained_intron Homo_sapiens 0 512
ENST00000480474 WAC-014 retained_intron Homo_sapiens 0 357
ENST00000495268 WAC-020 retained_intron Homo_sapiens 0 303
ENST00000526722 WAC-024 protein_coding Homo_sapiens 0 267
ENST00000528491 WAC-021 processed_transcript Homo_sapiens 0 505
ENST00000530865 WAC-023 retained_intron Homo_sapiens 0 346
ENST00000532233 WAC-022 processed_transcript Homo_sapiens 0 501

Loading