C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WW domain containing adaptor with coiled-coil
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375664 WAC-016 ENSG00000095787 9606 + 10:28532493-28623112 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungOvaryPlacentaENST00000375664
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta
ENST00000375664 2.078±0.00 5.749±1.76 3.309±0.00 5.729±3.69 1.927±0.00 2.814±0.48 2.338±0.00 5.730±1.80 3.385±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077T CIL_00077T_0002 CGP 10:28050993-28623112
CIL_0006FS CIL_0006FS_0002 CGP 10:28532493-28682939

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000993 IDA RNA polymerase II core binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0010390 IMP histone monoubiquitination
GO:0016239 IMP positive regulation of macroautophagy
GO:0032435 IMP negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0044783 IMP G1 DNA damage checkpoint
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0071894 IMP histone H2B conserved C-terminal lysine ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167020 Wac-001 protein_coding Mus_musculus 0 4220
ENSMUST00000074919 Wac-005 protein_coding Mus_musculus 0 4012
ENSMUST00000092112 Wac-007 protein_coding Mus_musculus 0 2809
ENSMUST00000172018 Wac-003 protein_coding Mus_musculus 0 2649
ENSMUST00000171042 Wac-002 protein_coding Mus_musculus 0 1834
ENSMUST00000166062 Wac-004 protein_coding Mus_musculus 0 1692
ENSMUST00000171486 Wac-006 protein_coding Mus_musculus 0 1284
ENSMUST00000170854 Wac-015 protein_coding Mus_musculus 0 968
ENSMUST00000167542 Wac-016 protein_coding Mus_musculus 0 856
ENSMUST00000169478 Wac-017 protein_coding Mus_musculus 0 843
ENSMUST00000168446 Wac-011 protein_coding Mus_musculus 0 817
ENSMUST00000165854 Wac-008 protein_coding Mus_musculus 0 804
ENSMUST00000167057 Wac-014 retained_intron Mus_musculus 0 702
ENSMUST00000169010 Wac-013 protein_coding Mus_musculus 0 664
ENSMUST00000166378 Wac-009 protein_coding Mus_musculus 0 359
ENSMUST00000165572 Wac-012 retained_intron Mus_musculus 0 346
ENSMUST00000170932 Wac-010 protein_coding Mus_musculus 2e-21 110
ENSMUST00000078259 Nsl1-001 protein_coding Mus_musculus 0.000000000002 81

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