C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 1 (chaperonin 10)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075242 Hspe1-001 ENSMUSG00000073676 10090 + 1:55088132-55091307 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075242
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075242 27.512±2.55 70.329±11.90 86.919±12.04 82.066±14.06 20.481±2.53 14.571±2.04 43.366±2.12 59.848±18.33 176.108±160.68 10.556±0.49 68.389±5.96 100.639±155.52 394.651±308.95 32.019±36.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X7 CIL_0007X7_0002 VISTA 1:54604981-55208576
CIL_0002KH CIL_0002KH_0002 CGP 1:55052770-55088243
CIL_00042Q CIL_00042Q_0003 CGP 1:55077835-55091307
CIL_00042D CIL_00042D_0003 CGP 1:55088132-55154899

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IEA osteoblast differentiation
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005739 ISS mitochondrion
GO:0005759 IEA mitochondrial matrix
GO:0006457 IEA protein folding
GO:0006950 IEA response to stress
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding
GO:0051087 ISS chaperone binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233893 HSPE1-001 protein_coding Homo_sapiens 0 538
ENST00000406997 HSPE1P8-001 processed_pseudogene Homo_sapiens 0 289
ENST00000409468 HSPE1-004 protein_coding Homo_sapiens 0 344
ENST00000409729 HSPE1-002 protein_coding Homo_sapiens 0 217
ENST00000426640 HSPE1P16-001 processed_pseudogene Homo_sapiens 4e-37 158
ENST00000438283 HSPE1P21-001 processed_pseudogene Homo_sapiens 0 224
ENST00000440046 HSPE1P9-001 unprocessed_pseudogene Homo_sapiens 0 335
ENST00000463841 HSPE1-005 retained_intron Homo_sapiens 0 337
ENST00000465573 HSPE1-007 processed_transcript Homo_sapiens 0 289
ENST00000479457 HSPE1P6-001 processed_pseudogene Homo_sapiens 0 300
ENST00000538133 HSPE1P20-001 processed_pseudogene Homo_sapiens 0 228
ENST00000550617 HSPE1P4-001 processed_pseudogene Homo_sapiens 0 342
ENST00000554777 HSPE1P2-001 processed_pseudogene Homo_sapiens 0 368
ENST00000559254 HSPE1P3-001 processed_pseudogene Homo_sapiens 0 350
ENST00000561489 HSPE1P5-001 transcribed_processed_pseudogene Homo_sapiens 0 318
ENST00000604681 HSPE1P7-001 processed_pseudogene Homo_sapiens 0 339

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