C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 10kDa protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000233893 HSPE1-001 ENSG00000115541 9606 + 2:197499994-197503457 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000233893
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000233893 38.214±0.00 39.156±21.62 42.814±0.00 101.999±0.00 33.176±0.00 98.380±0.00 126.137±0.00 68.867±0.00 15.583±7.07 189.073±99.66 58.006±11.47 56.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X7 CIL_0007X7_0001 VISTA 2:196975905-197591368
CIL_0002KH CIL_0002KH_0001 CGP 2:197453423-197516737
CIL_00042Q CIL_00042Q_0002 CGP 2:197486581-197516737
CIL_00042D CIL_00042D_0002 CGP 2:197499994-197550726

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IDA osteoblast differentiation
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005739 ISS mitochondrion
GO:0005759 IEA mitochondrial matrix
GO:0006457 IEA protein folding
GO:0006919 NAS activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006986 TAS response to unfolded protein
GO:0016020 IDA membrane
GO:0044822 IDA poly(A) RNA binding
GO:0051082 NAS unfolded protein binding
GO:0051087 ISS chaperone binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075242 Hspe1-001 protein_coding Mus_musculus 0 538
ENSMUST00000051437 Hspe1-ps2-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000119538 Hspe1-ps4-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000120275 Hspe1-ps6-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000118080 Hspe1-ps5-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000172726 Hspe1-ps3-001 processed_pseudogene Mus_musculus 0 270

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