C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00042D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056167-ENSDARG00000056085 CGP 7955 9:33334325-33346170
GeneTranscriptPositionBiotype
ENSDARG00000056085 (mob4)
MOB family member 4, phocein 		ENSDART00000078513 (mob4-001) 33340170-33346170 protein_coding
ENSDARG00000056167 (hspe1)
heat shock 10 protein 1 (chaperonin 10) 		ENSDART00000078608 (hspe1-201) 33334857-33337884 protein_coding
ENSDART00000127916 (hspe1-002) 33334325-33337884 protein_coding
ENSDART00000143103 (hspe1-001) 33334433-33338315 protein_coding
ENSDART00000144947 (hspe1-003) 33334883-33337550 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00042D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115541-ENSG00000270757 CGP 9606 2:197499994-197550726
GeneTranscriptPositionBiotype
ENSG00000115541 (HSPE1)
heat shock 10kDa protein 1 		ENST00000233893 (HSPE1-001) 197499994-197503457 protein_coding
ENST00000409468 (HSPE1-004) 197500379-197503382 protein_coding
ENST00000409729 (HSPE1-002) 197500140-197503296 protein_coding
ENST00000463841 (HSPE1-005) 197500882-197503381 retained_intron
ENST00000465573 (HSPE1-007) 197500543-197503381 processed_transcript
ENST00000473395 (HSPE1-003) 197500349-197501551 retained_intron
ENST00000495200 (HSPE1-006) 197500438-197501129 retained_intron
ENSG00000144381 (HSPD1)
heat shock 60kDa protein 1 (chaperonin) 		ENST00000345042 (HSPD1-201) 197486586-197500274 protein_coding
ENST00000388968 (HSPD1-001) 197486581-197500047 protein_coding
ENST00000418022 (HSPD1-012) 197498674-197499840 protein_coding
ENST00000426480 (HSPD1-009) 197497168-197516737 protein_coding
ENST00000428204 (HSPD1-010) 197497285-197499866 protein_coding
ENST00000430176 (HSPD1-013) 197494148-197500208 protein_coding
ENST00000439605 (HSPD1-011) 197497317-197499835 protein_coding
ENST00000440114 (HSPD1-007) 197494640-197499822 nonsense_mediated_decay
ENST00000452200 (HSPD1-006) 197494194-197500221 protein_coding
ENST00000461097 (HSPD1-014) 197496891-197499817 retained_intron
ENST00000476746 (HSPD1-008) 197495051-197499879 retained_intron
ENST00000482167 (HSPD1-004) 197493320-197494474 retained_intron
ENST00000486181 (HSPD1-005) 197494150-197497507 retained_intron
ENST00000491249 (HSPD1-003) 197487974-197490572 retained_intron
ENSG00000231699 (AC020550.7)
 ENST00000447385 (AC020550.7-001) 197533803-197533965 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00042D_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000073676-ENSMUSG00000025979 CGP 10090 1:55088132-55154899
GeneTranscriptPositionBiotype
ENSMUSG00000025979 (Mob4)
MOB family member 4, phocein 		ENSMUST00000027122 (Mob4-006) 55131282-55152999 protein_coding
ENSMUST00000159311 (Mob4-003) 55131231-55153938 protein_coding
ENSMUST00000159743 (Mob4-007) 55131326-55145383 retained_intron
ENSMUST00000161122 (Mob4-004) 55131287-55153359 nonsense_mediated_decay
ENSMUST00000162364 (Mob4-001) 55131231-55154899 protein_coding
ENSMUST00000162553 (Mob4-005) 55131320-55152783 protein_coding
ENSMUST00000162930 (Mob4-002) 55131260-55154898 retained_intron
ENSMUST00000187422 (Mob4-008) 55147630-55148517 retained_intron
ENSMUSG00000025980 (Hspd1)
heat shock protein 1 (chaperonin) 		ENSMUST00000027123 (Hspd1-001) 55077835-55088024 protein_coding
ENSMUST00000127861 (Hspd1-002) 55083067-55088243 protein_coding
ENSMUST00000144077 (Hspd1-003) 55084533-55088243 protein_coding
ENSMUSG00000073676 (Hspe1)
heat shock protein 1 (chaperonin 10) 		ENSMUST00000075242 (Hspe1-001) 55088132-55091307 protein_coding
ENSMUST00000134628 (Hspe1-002) 55088314-55089915 retained_intron
ENSMUSG00000089670 (Gm16581)
predicted gene 16581 		ENSMUST00000160730 (Gm16581-001) 55127297-55128287 processed_pseudogene
ENSMUSG00000100736 (RP23-16N14.6)
predicted gene 5147 		ENSMUST00000185999 (RP23-16N14.6-001) 55120080-55120873 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042D_0001ENSDARG00000056085ENSDART00000078513ENSDARG00000056167ENSDART00000078608ENSDART00000127916ENSDART00000143103ENSDART00000144947CIL_00042D_0002ENSG00000115541ENST00000233893ENST00000409468ENST00000409729ENST00000463841ENST00000465573ENST00000473395ENST00000495200ENSG00000144381ENST00000345042ENST00000388968ENST00000418022ENST00000426480ENST00000428204ENST00000430176ENST00000439605ENST00000440114ENST00000452200ENST00000461097ENST00000476746ENST00000482167ENST00000486181ENST00000491249ENSG00000231699ENST00000447385CIL_00042D_0003ENSMUSG00000025979ENSMUST00000027122ENSMUST00000159311ENSMUST00000159743ENSMUST00000161122ENSMUST00000162364ENSMUST00000162553ENSMUST00000162930ENSMUST00000187422ENSMUSG00000025980ENSMUST00000027123ENSMUST00000127861ENSMUST00000144077ENSMUSG00000073676ENSMUST00000075242ENSMUST00000134628ENSMUSG00000089670ENSMUST00000160730ENSMUSG00000100736ENSMUST00000185999
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042D_0001ENSDARG00000056085ENSDART00000078513ENSDARG00000056167ENSDART00000078608ENSDART00000143103CIL_00042D_0002ENSG00000115541ENST00000233893ENST00000409468ENSG00000144381ENST00000345042ENST00000388968ENSG00000231699ENST00000447385CIL_00042D_0003ENSMUSG00000025979ENSMUST00000027122ENSMUST00000159311ENSMUST00000162364ENSMUST00000162553ENSMUST00000162930ENSMUSG00000025980ENSMUST00000027123ENSMUST00000127861ENSMUSG00000073676ENSMUST00000075242ENSMUSG00000089670ENSMUST00000160730ENSMUSG00000100736ENSMUST00000185999
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056085 ENSDART00000078513 N/A N/A N/A 48.300±27.32 N/A N/A 29.590±28.94 20.936±15.89 4.814±0.00 N/A 39.454±0.00 N/A N/A N/A
ENSDARG00000056167 ENSDART00000078608 N/A N/A N/A 33.575±20.77 N/A N/A 139.242±58.07 51.664±0.00 43.331±0.00 N/A 40.019±0.00 N/A N/A N/A
ENSDART00000127916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143103 N/A N/A N/A 11.977±4.90 N/A N/A 25.452±4.83 9.134±0.78 N/A N/A N/A N/A N/A N/A
ENSDART00000144947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115541 ENST00000233893 N/A 38.214±0.00 N/A 39.156±21.62 42.814±0.00 101.999±0.00 33.176±0.00 98.380±0.00 126.137±0.00 68.867±0.00 15.583±7.07 189.073±99.66 58.006±11.47 56.055±0.00
ENST00000409468 N/A N/A 39.761±0.00 33.127±0.00 N/A N/A 14.526±0.00 63.878±0.00 N/A N/A N/A N/A N/A N/A
ENST00000409729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144381 ENST00000345042 N/A 14.459±0.00 8.827±0.00 N/A N/A N/A N/A 19.470±4.17 N/A N/A 1.316±0.00 32.405±12.49 39.871±22.45 22.333±2.04
ENST00000388968 42.857±0.00 22.990±0.00 10.981±0.00 20.737±9.46 30.253±15.37 67.372±47.34 12.188±8.84 52.562±28.37 62.740±51.62 36.228±25.32 24.364±0.00 98.270±77.55 36.872±5.22 22.618±8.96
ENST00000418022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231699 ENST00000447385 N/A N/A N/A N/A N/A 1.042±0.32 N/A N/A N/A 3.667±0.00 N/A 1.087±0.00 1.135±0.00 0.270±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025979 ENSMUST00000027122 N/A N/A N/A 28.290±0.00 N/A N/A N/A N/A N/A N/A N/A 25.926±12.03 32.190±17.44 2.044±0.00
ENSMUST00000159311 3.945±0.00 N/A N/A N/A 4.138±1.87 N/A N/A N/A N/A N/A N/A 3.162±0.64 2.566±0.16 N/A
ENSMUST00000159743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162364 9.747±1.93 32.781±4.87 23.945±2.41 16.309±9.93 7.878±0.83 10.977±1.68 7.139±0.33 11.024±1.31 9.285±2.05 12.581±0.40 10.344±0.46 9.790±2.60 9.101±6.87 2.792±0.39
ENSMUST00000162553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.817±2.94 N/A
ENSMUST00000162930 N/A N/A N/A N/A 0.976±0.00 1.414±0.00 N/A N/A 0.675±0.00 N/A N/A 2.080±0.32 N/A 0.212±0.13
ENSMUST00000187422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025980 ENSMUST00000027123 25.715±0.76 42.630±5.63 33.874±0.04 39.190±0.59 17.316±3.25 9.999±0.81 33.091±3.36 51.256±10.43 97.063±62.31 7.633±1.30 50.137±4.84 38.428±59.84 91.750±55.16 4.220±1.38
ENSMUST00000127861 N/A N/A N/A 43.447±0.00 N/A 4.694±0.00 N/A N/A N/A 5.084±0.77 N/A N/A 456.749±0.00 N/A
ENSMUST00000144077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000073676 ENSMUST00000075242 27.512±2.55 70.329±11.90 86.919±12.04 82.066±14.06 20.481±2.53 14.571±2.04 43.366±2.12 59.848±18.33 176.108±160.68 10.556±0.49 68.389±5.96 100.639±155.52 394.651±308.95 32.019±36.24
ENSMUST00000134628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000089670 ENSMUST00000160730 0.034±0.01 0.079±0.04 0.779±0.03 0.422±0.29 0.020±0.00 0.060±0.02 0.042±0.00 0.038±0.02 0.191±0.20 N/A N/A 0.026±0.00 0.047±0.04 0.043±0.01
ENSMUSG00000100736 ENSMUST00000185999 0.102±0.00 N/A 0.036±0.00 0.074±0.02 0.068±0.00 0.110±0.00 0.093±0.05 0.052±0.00 0.011±0.00 N/A N/A 0.109±0.00 0.121±0.12 0.043±0.00

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