C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exosome component 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075280 Exosc1-201 ENSMUSG00000034321 10090 - 19:41922980-41933314 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075280
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075280 6.872±1.79 5.601±0.77 8.253±0.66 5.468±3.08 5.247±0.83 4.276±1.76 2.735±0.71 5.149±0.56 7.794±5.71 6.844±0.42 3.999±0.50 9.161±2.65 8.002±4.22 7.925±3.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Y0 CIL_0005Y0_0002 CGP 19:41922980-41944095

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000178 ISS exosome (RNase complex)
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005730 ISS nucleolus
GO:0005737 IEA cytoplasm
GO:0006364 IEA rRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370884 EXOSC1-004 protein_coding Homo_sapiens 0 311
ENST00000370885 EXOSC1-008 protein_coding Homo_sapiens 0 464
ENST00000370886 EXOSC1-009 protein_coding Homo_sapiens 0 457
ENST00000370902 EXOSC1-001 protein_coding Homo_sapiens 0 769
ENST00000471049 EXOSC1-012 processed_transcript Homo_sapiens 0 377
ENST00000472345 EXOSC1-010 processed_transcript Homo_sapiens 0 457
ENST00000476234 EXOSC1-006 retained_intron Homo_sapiens 0 418
ENST00000477692 EXOSC1-005 protein_coding Homo_sapiens 0 420
ENST00000485122 EXOSC1-011 protein_coding Homo_sapiens 0 460
ENST00000489158 EXOSC1-003 retained_intron Homo_sapiens 0 222

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