C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005Y0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171311-ENSG00000171307 CGP 9606 10:97436142-97457370
GeneTranscriptPositionBiotype
ENSG00000171307 (ZDHHC16)
zinc finger, DHHC-type containing 16 		ENST00000345745 (ZDHHC16-006) 97446210-97457370 protein_coding
ENST00000352634 (ZDHHC16-004) 97446202-97457366 protein_coding
ENST00000353979 (ZDHHC16-005) 97446204-97457366 protein_coding
ENST00000370842 (ZDHHC16-007) 97446204-97457366 protein_coding
ENST00000370846 (ZDHHC16-013) 97446197-97457085 protein_coding
ENST00000370854 (ZDHHC16-003) 97446170-97457366 protein_coding
ENST00000393760 (ZDHHC16-201) 97446131-97457363 protein_coding
ENST00000414567 (ZDHHC16-009) 97446191-97453614 protein_coding
ENST00000417044 (ZDHHC16-017) 97451851-97457311 protein_coding
ENST00000420089 (ZDHHC16-016) 97451749-97457294 protein_coding
ENST00000433086 (ZDHHC16-010) 97450381-97455757 protein_coding
ENST00000459777 (ZDHHC16-011) 97446195-97456924 processed_transcript
ENST00000462924 (ZDHHC16-014) 97446212-97456018 processed_transcript
ENST00000466895 (ZDHHC16-012) 97446196-97456985 processed_transcript
ENST00000487315 (ZDHHC16-001) 97453554-97457249 processed_transcript
ENST00000492610 (ZDHHC16-015) 97450828-97452465 processed_transcript
ENST00000492733 (ZDHHC16-002) 97455717-97456428 processed_transcript
ENST00000495735 (ZDHHC16-008) 97451736-97457361 processed_transcript
ENSG00000171311 (EXOSC1)
exosome component 1 		ENST00000370884 (EXOSC1-004) 97436406-97446017 protein_coding
ENST00000370885 (EXOSC1-008) 97436248-97445993 protein_coding
ENST00000370886 (EXOSC1-009) 97436244-97445988 protein_coding
ENST00000370902 (EXOSC1-001) 97436142-97446017 protein_coding
ENST00000471049 (EXOSC1-012) 97436540-97445973 processed_transcript
ENST00000472345 (EXOSC1-010) 97437260-97445910 processed_transcript
ENST00000474309 (EXOSC1-013) 97444222-97445833 processed_transcript
ENST00000476234 (EXOSC1-006) 97440764-97446006 retained_intron
ENST00000477692 (EXOSC1-005) 97436396-97445850 protein_coding
ENST00000485122 (EXOSC1-011) 97436333-97445985 protein_coding
ENST00000489158 (EXOSC1-003) 97443787-97446006 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0005Y0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034321-ENSMUSG00000025157 CGP 10090 19:41922980-41944095
GeneTranscriptPositionBiotype
ENSMUSG00000025157 (Zdhhc16)
zinc finger, DHHC domain containing 16 		ENSMUST00000026154 (Zdhhc16-201) 41933472-41944095 protein_coding
ENSMUSG00000025159 (Mms19)
MMS19 (MET18 S. cerevisiae) 		ENSMUST00000026168 (Mms19-009) 41944377-41981132 protein_coding
ENSMUST00000163287 (Mms19-011) 41944209-41969722 protein_coding
ENSMUST00000163398 (Mms19-010) 41944211-41981117 nonsense_mediated_decay
ENSMUST00000164776 (Mms19-004) 41944211-41981136 nonsense_mediated_decay
ENSMUST00000165043 (Mms19-017) 41947165-41948232 retained_intron
ENSMUST00000166090 (Mms19-012) 41944489-41955138 nonsense_mediated_decay
ENSMUST00000166517 (Mms19-016) 41949727-41951344 retained_intron
ENSMUST00000167820 (Mms19-015) 41946980-41953944 protein_coding
ENSMUST00000167927 (Mms19-006) 41941086-41981114 nonsense_mediated_decay
ENSMUST00000168484 (Mms19-005) 41953097-41981130 nonsense_mediated_decay
ENSMUST00000168737 (Mms19-014) 41954457-41955167 retained_intron
ENSMUST00000169765 (Mms19-008) 41962988-41969741 protein_coding
ENSMUST00000169775 (Mms19-003) 41947675-41981137 nonsense_mediated_decay
ENSMUST00000169779 (Mms19-018) 41944549-41945627 retained_intron
ENSMUST00000169933 (Mms19-013) 41962780-41963107 retained_intron
ENSMUST00000170209 (Mms19-007) 41944205-41964627 retained_intron
ENSMUST00000171561 (Mms19-001) 41941086-41981157 protein_coding
ENSMUST00000171755 (Mms19-002) 41946792-41981139 retained_intron
ENSMUSG00000034321 (Exosc1)
exosome component 1 		ENSMUST00000075280 (Exosc1-201) 41922980-41933314 protein_coding
ENSMUST00000112123 (Exosc1-202) 41922980-41933314 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y0_0001ENSG00000171307ENST00000345745ENST00000352634ENST00000353979ENST00000370842ENST00000370846ENST00000370854ENST00000393760ENST00000414567ENST00000417044ENST00000420089ENST00000433086ENST00000459777ENST00000462924ENST00000466895ENST00000487315ENST00000492610ENST00000492733ENST00000495735ENSG00000171311ENST00000370884ENST00000370885ENST00000370886ENST00000370902ENST00000471049ENST00000472345ENST00000474309ENST00000476234ENST00000477692ENST00000485122ENST00000489158CIL_0005Y0_0002ENSMUSG00000025157ENSMUST00000026154ENSMUSG00000025159ENSMUST00000026168ENSMUST00000163287ENSMUST00000163398ENSMUST00000164776ENSMUST00000165043ENSMUST00000166090ENSMUST00000166517ENSMUST00000167820ENSMUST00000167927ENSMUST00000168484ENSMUST00000168737ENSMUST00000169765ENSMUST00000169775ENSMUST00000169779ENSMUST00000169933ENSMUST00000170209ENSMUST00000171561ENSMUST00000171755ENSMUSG00000034321ENSMUST00000075280ENSMUST00000112123
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y0_0001ENSG00000171307ENST00000345745ENST00000352634ENST00000353979ENST00000370846ENST00000370854ENST00000393760ENST00000417044ENST00000420089ENST00000433086ENST00000487315ENST00000492610ENST00000495735ENSG00000171311ENST00000370884ENST00000370885ENST00000370886ENST00000370902ENST00000476234ENST00000477692ENST00000485122ENST00000489158CIL_0005Y0_0002ENSMUSG00000025157ENSMUST00000026154ENSMUSG00000025159ENSMUST00000026168ENSMUST00000163287ENSMUST00000163398ENSMUST00000164776ENSMUST00000166090ENSMUST00000167927ENSMUST00000170209ENSMUST00000171561ENSMUST00000171755ENSMUSG00000034321ENSMUST00000075280ENSMUST00000112123
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171307 ENST00000345745 N/A N/A N/A N/A N/A N/A N/A 2.269±0.00 2.669±0.00 N/A N/A N/A N/A N/A
ENST00000352634 N/A N/A 1.367±0.00 N/A N/A 1.875±0.03 N/A 7.184±0.00 N/A 2.310±0.00 N/A 4.182±0.00 12.019±0.38 3.100±0.00
ENST00000353979 3.061±0.00 N/A N/A 2.021±0.29 5.228±0.00 0.890±0.00 2.589±2.33 5.807±0.00 3.874±0.00 N/A 9.542±0.00 6.917±3.70 8.322±0.00 3.954±0.37
ENST00000370842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370846 N/A N/A N/A N/A N/A N/A 0.813±0.00 N/A N/A 2.952±0.00 N/A N/A N/A N/A
ENST00000370854 0.975±0.00 5.806±0.00 N/A 2.929±0.00 1.602±0.00 2.603±0.00 0.526±0.00 N/A 2.454±0.10 3.930±1.40 N/A 4.637±0.80 12.647±0.35 N/A
ENST00000393760 N/A N/A N/A N/A 1.092±0.00 N/A N/A 2.423±0.00 N/A 0.751±0.00 N/A 2.710±0.00 N/A N/A
ENST00000414567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417044 N/A N/A N/A 2.059±0.00 1.931±0.00 N/A N/A 3.152±0.86 2.947±0.00 N/A 3.050±0.00 2.421±1.03 N/A N/A
ENST00000420089 1.285±0.00 N/A N/A N/A N/A 1.457±0.00 3.374±0.00 N/A 2.484±0.00 N/A 2.312±0.00 13.945±0.00 14.541±0.00 9.273±0.00
ENST00000433086 N/A N/A 3.428±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.869±0.00 24.663±0.00 16.297±0.00
ENST00000492610 N/A N/A N/A N/A N/A N/A N/A N/A 2.077±0.00 N/A N/A N/A N/A N/A
ENST00000492733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495735 N/A N/A N/A N/A N/A 1.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171311 ENST00000370884 N/A N/A N/A 2.395±0.00 2.280±0.00 N/A N/A 5.093±0.00 N/A N/A N/A N/A N/A 3.785±0.00
ENST00000370885 9.868±0.00 12.157±0.00 2.121±0.00 2.955±1.70 9.590±0.00 4.714±3.97 2.259±0.00 9.829±0.00 10.208±0.00 10.619±0.00 7.545±0.00 4.146±2.53 4.837±0.34 13.858±0.00
ENST00000370886 N/A N/A N/A 2.038±0.00 N/A N/A N/A N/A 3.659±0.00 N/A 2.275±0.00 N/A N/A N/A
ENST00000370902 3.301±0.00 9.311±0.00 N/A 2.018±0.35 2.806±0.61 3.064±0.00 1.492±0.05 2.681±0.45 3.003±0.68 1.926±0.00 N/A 10.354±6.44 4.605±2.60 4.517±1.43
ENST00000471049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.632±0.00 N/A N/A
ENST00000477692 N/A N/A N/A 5.000±0.00 N/A 4.143±1.75 N/A N/A N/A N/A 4.320±0.00 8.921±0.00 4.019±0.00 7.678±0.00
ENST00000485122 4.699±0.00 6.783±0.00 N/A N/A 4.607±0.00 N/A 2.663±0.00 N/A N/A 6.512±0.00 N/A N/A N/A N/A
ENST00000489158 N/A N/A N/A 0.470±0.05 N/A N/A 0.180±0.00 N/A 0.226±0.00 N/A N/A 1.120±0.00 N/A 1.069±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025157 ENSMUST00000026154 10.518±2.69 18.068±0.26 11.797±2.79 16.915±9.14 17.066±0.00 15.269±5.61 8.451±0.00 13.256±2.76 11.746±4.14 19.324±0.00 3.075±0.20 23.958±10.46 15.028±5.77 8.760±3.73
ENSMUSG00000025159 ENSMUST00000026168 7.221±1.47 8.258±0.58 N/A N/A 11.386±2.05 7.731±0.42 4.167±0.89 7.898±2.30 4.993±0.98 10.841±2.15 N/A 14.120±3.53 5.386±0.86 5.772±1.48
ENSMUST00000163287 N/A N/A 4.443±0.00 2.080±0.00 8.952±0.00 N/A N/A 4.273±0.00 N/A N/A 1.600±0.00 6.378±0.00 3.297±0.00 0.964±0.00
ENSMUST00000163398 6.598±1.55 5.707±1.05 6.373±0.91 4.962±2.32 7.107±0.05 3.803±0.00 3.554±0.75 4.990±0.53 4.436±1.15 6.831±1.11 2.331±0.40 5.080±0.84 6.527±1.57 3.930±1.77
ENSMUST00000164776 N/A N/A 7.932±0.00 8.857±1.06 N/A N/A 2.153±0.00 N/A 5.166±0.97 N/A 2.152±0.61 N/A 5.421±0.72 3.574±0.12
ENSMUST00000165043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166090 N/A 8.887±1.67 N/A N/A N/A 7.599±0.48 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167927 3.326±1.32 3.475±0.65 4.241±1.99 5.271±0.10 4.598±0.61 2.880±0.32 1.391±0.32 2.961±0.26 2.419±0.82 3.947±0.17 0.860±0.13 4.181±1.16 3.754±1.07 1.830±0.87
ENSMUST00000168484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.263±0.00 N/A N/A
ENSMUST00000171561 N/A N/A N/A 1.086±0.00 N/A N/A N/A N/A N/A N/A 1.007±0.17 1.147±0.00 2.498±0.74 0.320±0.00
ENSMUST00000171755 N/A 7.142±1.51 N/A N/A 6.404±0.00 5.267±0.00 N/A N/A N/A N/A N/A 9.496±1.00 N/A N/A
ENSMUSG00000034321 ENSMUST00000075280 6.872±1.79 5.601±0.77 8.253±0.66 5.468±3.08 5.247±0.83 4.276±1.76 2.735±0.71 5.149±0.56 7.794±5.71 6.844±0.42 3.999±0.50 9.161±2.65 8.002±4.22 7.925±3.85
ENSMUST00000112123 N/A N/A N/A N/A N/A 1.986±0.00 N/A N/A 0.691±0.00 1.043±0.00 N/A 1.592±0.00 N/A N/A

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