C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dendrin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075444 Ddn-201 ENSMUSG00000059213 10090 - 15:98803782-98807925 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENSMUST00000075444
Transcript ID Brain Kidney
ENSMUST00000075444 157.715±0.00 3.882±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000D CIL_00000D_0002 CGP 15:98789857-98807925
CIL_00000E CIL_00000E_0002 CGP 15:98803782-98831508

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000982 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0030425 IEA dendrite
GO:0042995 IEA cell projection
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372262 CDH22-001 protein_coding Homo_sapiens 0.000000000000002 90
ENST00000421952 DDN-001 protein_coding Homo_sapiens 0 1816
ENST00000537909 CDH22-201 protein_coding Homo_sapiens 0.000000000000002 90

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