Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	APOBEC1 complementation factor
ENSMUST00000075838	A1cf-201	ENSMUSG00000052595	10090	+	19:31868761-31949406	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000075838	0.008±0.00	0.039±0.01	0.004±0.00	0.152±0.05	3.549±2.15	0.022±0.00	6.837±4.54	16.314±12.35	0.026±0.02	0.012±0.00	0.039±0.01	0.785±1.05	0.241±0.01

Conserved Regions
Gene is not located within a conserved region.

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000166	IEA	nucleotide binding
GO:0003723	TAS	RNA binding
GO:0003727	ISS	single-stranded RNA binding
GO:0005634	IDA	nucleus
GO:0005737	ISS	cytoplasm
GO:0005783	IEA	endoplasmic reticulum
GO:0006397	IEA	mRNA processing
GO:0010609	IGI	mRNA localization resulting in posttranscriptional regulation of gene expression
GO:0016554	TAS	cytidine to uridine editing
GO:0016556	IGI	mRNA modification
GO:0030895	ISS	apolipoprotein B mRNA editing enzyme complex
GO:0050821	ISS	protein stabilization

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000282641	A1CF-201	protein_coding	Homo_sapiens	0	2091
ENST00000373993	A1CF-002	protein_coding	Homo_sapiens	0	2231
ENST00000373995	A1CF-006	protein_coding	Homo_sapiens	0	1842
ENST00000373997	A1CF-004	protein_coding	Homo_sapiens	0	2087
ENST00000374001	A1CF-001	protein_coding	Homo_sapiens	0	2185
ENST00000395489	A1CF-202	protein_coding	Homo_sapiens	0	1986
ENST00000395495	A1CF-203	protein_coding	Homo_sapiens	0	1842
ENST00000414883	A1CF-003	protein_coding	Homo_sapiens	0	854
ENST00000473480	A1CF-005	processed_transcript	Homo_sapiens	0	817
ENST00000493415	A1CF-007	processed_transcript	Homo_sapiens	0	972

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